Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02442 ATGGGTAAGAAGAGCTGGTTTTCTCTGATAAAGAGGCTTTTTAGATGGGGGACACAATCTGAACAAGGCAAGAAGGAGAAGAGGATGAAGATTAAGAGATTAGCTCCAATTGCTGTTCCATCAAAAGAAACGACAATGCTAGGCGGTGAAGAAGATGAAGAACAGAGGAAGAATGCTTTATCAGTGAAAGAAAATTCTGCAGCCATCAGAATCCAAGCTGCATTCAGGGGTTACCTAGCAAGGAAGGCATTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATTATTAGAGGCAGAGCAGTGAGACGCCAAGCTTTGAGGTCCCTCAAGTGTCTGCAGTCAATTGTTAGCATCCAATCACAAGTTTCTGCTTCAAGGAGACTTCAAATGCTTGAAGGCAGATCTCTCTATGATCAACCTGAAACCTTCCATGCTTCAAGGGACAAGATAATAAAGATGGATTCAAACAGTGAAAAAAGGTGGGATGACAGCATTTTGCTGAAGGAAGAGGTAGAGACAACATGCATGAGCAAGAAAGAAGCTCTTCTTAGAAGGGAGAGAATAAAACAGTACTCATTTAACCATAGAATGTCTGCAGAAACAGAAAGAAACAAAGTAAATGGGAGATGGAGGTACTGGCTAGAGCAATGGGTAGATACCCAACTTTCTAAGAGCAAAGAGCTTGAAGATTTAGACAGTGCAGCTTTCAGCTCTCATTACAAAGGTGAAGAACACAAGGATAATAATGATGGAGGAAGATCACTGAAACTGAGAAATCCTCATCAGAGGCAAAACCAGATTGGAGAAGAGTTGAACTGTCACAGTAGGCAGTGTTCTTCAGTGGAAATTAGAGATGACTACTACTCATTCACAAGCTCTCCTGTGATACTACCCACTTACATGGCACCAACTGAATCAGCAAAAGCCAAAGCAAGATCCATAAGCTCCCCAAGATTAAGGGCATGGAATAATTTGGAGACTGACTCTGATTATAGCTATTCATCACCATGCAAGAAAAAGCCACCTCTCATTGTATCTTCTTCTGTTAACACTACTAGTGAGGTTTTTGGTGGTAGTAATAGGATTGGGAAGTTAAGTGGCAGCAAGTATAAACAAATGTCTCCTAGGTTAAAGAGTACAGTTTCAGTGATGAATAAGGCTTGA 1167 0.4113 MGKKSWFSLIKRLFRWGTQSEQGKKEKRMKIKRLAPIAVPSKETTMLGGEEDEEQRKNALSVKENSAAIRIQAAFRGYLARKALRALKGIVKLQAIIRGRAVRRQALRSLKCLQSIVSIQSQVSASRRLQMLEGRSLYDQPETFHASRDKIIKMDSNSEKRWDDSILLKEEVETTCMSKKEALLRRERIKQYSFNHRMSAETERNKVNGRWRYWLEQWVDTQLSKSKELEDLDSAAFSSHYKGEEHKDNNDGGRSLKLRNPHQRQNQIGEELNCHSRQCSSVEIRDDYYSFTSSPVILPTYMAPTESAKAKARSISSPRLRAWNNLETDSDYSYSSPCKKKPPLIVSSSVNTTSEVFGGSNRIGKLSGSKYKQMSPRLKSTVSVMNKA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02442 388 Pfam Protein of unknown function (DUF4005) 286 352 IPR025064 -
Accr1g02442 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 108 IPR027417 -
Accr1g02442 388 PANTHER IQ-DOMAIN 5-RELATED 1 338 - -
Accr1g02442 388 SMART iq_5 63 85 IPR000048 GO:0005515
Accr1g02442 388 ProSiteProfiles IQ motif profile. 88 115 IPR000048 GO:0005515
Accr1g02442 388 ProSiteProfiles IQ motif profile. 64 92 IPR000048 GO:0005515
Accr1g02442 388 Pfam IQ calmodulin-binding motif 66 85 IPR000048 GO:0005515
Accr1g02442 388 Gene3D - 61 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02442 Accr-Chr1 60127048 60129616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02442 3 379 IQD Protein Family AT5G13460 44.262 7.88e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02442 - - gmx:100800192 367.466