Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02427 ATGGCGTTTGGTTTCAGGCTCATGAAGCAAATTCGCCATGTTCCTGAAGTCTTTTGTTGTTTGACTAATCCCTGGTCAATTGTGGAACTAGAACACGCTAGAAAGTTGTTCTCTGAGTTCCCATTCTTGAAGTTCGCTTATCAGATCACCAATGAGGCTATTCTTGAAGCCATGGAAAAAGAACCAGTCTTTCATATAATTGATCCCAATGCCACCAATGCAGCTCAATGGATACATCTTTTTCGTGCTTTGAAAGAACAACGCCAAGGAAACCCAGTGCCTCATGTGAAGATCACCATGATACATAAGAATAAAGATATTTTGCAACGGGTGGGGTCTGAATTGATTCAGGAAGCTAGTAAAATGAACATGCTCGTCCACTTCAATGGCATTGTGAGCAACCTAGAGAATGTTTGCTTTGAGAAATTGCCTCTGACGCCAGGAGAGCCACTTGCTATAAGCTGTGTTCTTATTCTTCATTCTCATCTTGCAGTTGATGATGATCAAATGAGTCCTGATTCAGAAGCACTACCAATTAAGATTAGGAGATTTTTGAATCAGCTTTGGAAACTCCATCCAAGGATCATGGTTGTTACAGAACAAGAATCAGATAACAATGGGTCTAGTTTGAGCGATAGGGTTGATAAGGCACTGAAATGGTATGCTGCACTGTTTGATAGCTTGGAAGCTAGTGTTCCAAAAGAGAGAGAAATAGAGAGAATAATGGTGGAGAGGATGATTCTAGGGGAGGATATAAAGAACATTATTGCTTGTGATGGAGCTGATAGAAAAGAGAGGCATGGCAAGTTCTTGAAGACTTGGAGGCCATTGCTTGAATTGGCTGGATTTAACGGGGTGCCTATGAGTTATGAGAGAATGTTAGAGGTAACAAGGCCATTGCAGAGCTATGGGCTTGAATACAAGTTAAAAGAGAACAATCAATGCCTGTTCACATGTTGGAATGATCTTCCTCTCTATTCTATATCAGCCTGGAAGTTCTTATGA 1005 0.409 MAFGFRLMKQIRHVPEVFCCLTNPWSIVELEHARKLFSEFPFLKFAYQITNEAILEAMEKEPVFHIIDPNATNAAQWIHLFRALKEQRQGNPVPHVKITMIHKNKDILQRVGSELIQEASKMNMLVHFNGIVSNLENVCFEKLPLTPGEPLAISCVLILHSHLAVDDDQMSPDSEALPIKIRRFLNQLWKLHPRIMVVTEQESDNNGSSLSDRVDKALKWYAALFDSLEASVPKEREIERIMVERMILGEDIKNIIACDGADRKERHGKFLKTWRPLLELAGFNGVPMSYERMLEVTRPLQSYGLEYKLKENNQCLFTCWNDLPLYSISAWKFL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02427 334 ProSiteProfiles GRAS family profile. 1 332 IPR005202 -
Accr1g02427 334 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 31 327 IPR005202 -
Accr1g02427 334 Pfam GRAS domain family 6 332 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02427 Accr-Chr1 59947637 59948641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02427 22 332 GRAS Transcription Factor Family AT1G50420 40.608 1.48e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g02427 GRAS 1.1e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02427 - - pcin:129316687 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02427 1 59947637 59948641 Accr1g02427 1 59947637 59948641 ECH