Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02426 ATGGTTATTGCAGAACAAGAATCAGACAACAAAGGACCTTCTCTGACAGACAGGCTTGACAAGGCACTGAATTTCTATGCTGCATTGTTTGACTGCTTGGAAGCTAATGTCTCGAAAGCGAAAGCAGTAGAAAGAATCATGCTGGAAAAGATGCTTCTTGGGAAGGAAATGATGAAAATTATTGGTTGTGATGGAGTTGATAGAAAAGAGAGGCATGGTAAGTTTCTGAAGACGTGGCGCCCATTGCTTGAATTGGCCGGGTTCGTGCGGATTCCTATGGACTACGACAGAATGTTGCAGGCGACGAGGCCATTGCAGAGCTATGGGAATGGATACAAGCTGCTAGACTTCAATCAATGTCTGTTTACTTGCTGGAATGATCTCCCACTCTTTTCCATATCAGCCTGGAGGTTCTAA 417 0.4436 MVIAEQESDNKGPSLTDRLDKALNFYAALFDCLEANVSKAKAVERIMLEKMLLGKEMMKIIGCDGVDRKERHGKFLKTWRPLLELAGFVRIPMDYDRMLQATRPLQSYGNGYKLLDFNQCLFTCWNDLPLFSISAWRF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02426 138 ProSiteProfiles GRAS family profile. 1 137 IPR005202 -
Accr1g02426 138 Pfam GRAS domain family 1 137 IPR005202 -
Accr1g02426 138 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 132 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02426 Accr-Chr1 59902944 59903360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02426 1 137 GRAS Transcription Factor Family AT1G50420 48.551 4.00e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g02426 GRAS 4.7e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02426 - - pcin:129316687 222.246