Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02425 ATGCAAACCCCACTTAATGGATTAAGTCAAATGATGAACAAATATTTTGCAGAGTTATTTGACAAACTAAGGATCAAACCTAGTCCTAACTCAGCCCTTTCCCCATGTCCTTCCCCTAAGATGGAGTGTTTTCTAAATGCAATCCAGAAACTCAAACCCAAGTTGATGCTCATCACTGAGCAAGAATCAAAAACCAACGAATCTTCTCTCAAGACAAGGCTTGAGAATGCACTAGTCTTCTATGGTGCACTCTTTGATTGCTTAGAGGCCAATGTTCCTAAAACAAGAGAAGCAGATAGATCAATCATGGAGAGGATGCTTTTGGGTGAAGAAATCAAGAACATCATTGCTTGTGAGGGAATTCAAAGAAAAGAGAGGCATGAGAAAGCTGAGACTTGGGTTAGATGGCTTGAACTAGCTGGGTTTCAAAGAAAACCTTTGAACTATGCTAGGATATTGCAAGTAACAAGGCCATTGCAAGACTTTGGAAGGGGTTATAAGCTTGAGGAGCATGATCAATGTTTGTTTGTCTGTTGGAATGATCGTCCACTCTATTCCGTAACGGCATGGAAGTTCTAG 579 0.4059 MQTPLNGLSQMMNKYFAELFDKLRIKPSPNSALSPCPSPKMECFLNAIQKLKPKLMLITEQESKTNESSLKTRLENALVFYGALFDCLEANVPKTREADRSIMERMLLGEEIKNIIACEGIQRKERHEKAETWVRWLELAGFQRKPLNYARILQVTRPLQDFGRGYKLEEHDQCLFVCWNDRPLYSVTAWKF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02425 192 ProSiteProfiles GRAS family profile. 1 191 IPR005202 -
Accr1g02425 192 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 187 IPR005202 -
Accr1g02425 192 Pfam GRAS domain family 40 191 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02425 Accr-Chr1 59896584 59897162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02425 40 191 GRAS Transcription Factor Family AT1G50420 53.595 1.19e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g02425 GRAS 2.1e-48 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02425 - - pcin:129316687 221.09