Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02424 ATGGAGTGTTTTCTAAAAGCAATCTGGAAACTCAAACCTAGGTTGATGCTCATCACTGAGCAAGAATCAAACACCAACGAATCTTCTCTTAAGACAAGGCTTGAGAATGCACTAGGCTTCTATGGTGCACTCTTTGATGGCTTAGAGGCCAATGTTCCTAAAGCAAGAGAAGCAGATAGATCAATCATGGAGAGGATGCTTTTGAGTGAAGAAATCAAGAACATCATTGCTTGTGAGGGAATTCAAAGAAAAGAGAGGCATGAGAAAGCTGAGACTTGGGTTAGATGGCTTGAACTAGCTGGGTTTCAGAGAAAACCTTTGAACAATGCTAGGATATTGCAAGTAACAAGGCACCTGCAAAACTATGGAGGGGGTTATAAGCTTGAGGAGCGTGATCAATGTTTGTTTGTTTGTTGGAATGATTGTCCACTCTATTTCATTTCAGTGTGGAAGTTCTAG 459 0.4096 MECFLKAIWKLKPRLMLITEQESNTNESSLKTRLENALGFYGALFDGLEANVPKAREADRSIMERMLLSEEIKNIIACEGIQRKERHEKAETWVRWLELAGFQRKPLNNARILQVTRHLQNYGGGYKLEERDQCLFVCWNDCPLYFISVWKF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02424 152 ProSiteProfiles GRAS family profile. 1 151 IPR005202 -
Accr1g02424 152 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 150 IPR005202 -
Accr1g02424 152 Pfam GRAS domain family 3 151 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02424 Accr-Chr1 59851414 59851872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02424 2 151 GRAS Transcription Factor Family AT1G50420 49.007 8.05e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g02424 GRAS 5.9e-46 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02424 - - pcin:129316687 201.06