Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02418 ATGAGAATATCCACTCTCTGTTGCATCATCCCCTTCCTCGTTTGCTTCCTCTGGTACAGTTCCACTCTGTCCAGTGCCTACTCTGACCTCGATGCTCTGCTCAAGCTCAAAGCTTCCCTCAAGGGACCCAAAGCTTCACCTTCTGCCATGGAGGATTGGAAACCCTCTGTTTCTCCCTCTGCTCACTGCAAATTCTCTGGAGTTACCTGCGACGATAGTTTCAGGGTTGTCTCTTTGAATGTCTCGTTCCATCCCCTGTTTGGCTCTATTCCGCCGGAGATCGGCCTTCTGGACCACCTTGTCTCTCTCACCCTTTCACAAGACAACCTCACCGGCGAGCTTCCAAAACAGCTAGCCAACCTTTCTTCTCTGAAAGTCCTCAACGTTTCGCACAACGCCTTGACCGGAAACTTCCCCGGGGAAATCACTCTCAACATGACGCAGCTTGAAGTTCTAGACGTTTATGATAACAGCTTCAACGGCACGTTACCGGAGGAGGTTGTGAATTTGAAGAATCTGAAGCAGCTTCGGCTTGCCGGAAACTACTTTTCCGGCGAGATACCTGAGAGTTATTCGGAGTTCGAGAGCTTGGAAATTCTGAAGTTGAATGAGAACAGCCTCAGAGGGAAAATCCCGGTGAGTTTAGTGAAATTGAAGAACCTCAGGGAATTGTATTTGGGGTATAGTAATGCGTACCAAGGAGGTATCCCGCCGGAGCTTGGCACGATGAGCACGCTTCAACTGCTCGATTTAGGAGGCTGTAATCTATCTGGCGAGATTCCACCGAGCTTGGGCAATTTGAAGAACGCGCATACTCTGTTCCTTCAAATGAACAACCTCACCGGAGAAATCCCACCTGAACTCTCCGGTATGACTAGCCTCATGTCGCTGGATTTATCCATCAACAGCCTCACCGGAGAGATACCCTCCAGTTTTTCAGAGTTAACGAACTTAACTTTGATCAATTTGTATGAAAACAAGCTTCGTGGCCCTATTCCATCATTCATCGGAGACCTTCCGAATTTGGAAGCTCTTCAGGTCTGGGAGAACAATTTCTCGTACATCTTGCCTCAGAATCTGGGCAGTAACGGGAAATTTAAGTTCTTCGACGTCGCGACCAATCATTTCACTGGGTTGGTTCCTAAAGATTTGTGTAAAGGAGAGAGGTTGAAGACTTTCATTCTCATGAATAATTCCTTCGACGGTCCAATTCCTGAGCAGCTCGGTAGGTGTAAATCTTTGGAAAAAGTTCGAATATCTAATAATTTCCTCAATGGCTCTATCCCTCCTGGGCTTTTCAATCTTCCTTTGGTGACGATGATCGACCTCAGTGACAACTTGTTATCCGGTGAGTTACCGTCGGATATGTCAGGCGATCTCATCGGAATTTTGACATTTTCCAATAATTTATTCACCGGCAAAATCCCACAGGCGATCGGGAAGCTTCGGAGCTTGCAGAAACTCTTGCTAGATCTGAATCATTTCGTTGGCGAGATTCCCGAGGAAATGTTCAACTTGCCGATGCTGACAAATGTGAACATAAGCTTCAACAATCTCAGCGGTCCGATTCCTAAATCCGTTACTCACTGTGCTTCCTTAACCGCTCTTGATCTCAGCATGAACAATCTTGCCGGAGAAATCCCAAGAGCAATCAATAACATAAGAGATCTTAGCATCCTCAATCTCTCAATGAACCATCTAACAGGCTCAATCCCAGAGGCGATCCGTGACATGGTGAGCCTGACCACACTTGATCTCTCCAACAACAACCTCGAAGGCAGAATCCCCACCGGCGGCCAATTCAGCGTCTTCTCCGGTGAGAGCTTCGCTGGAAACCCCAAACTCTGCTTCCCACAAGACCACTTCTGCAAATCCAACCACAAGTCGCCCCTAAAATCCACCAAAATCATCGTCATAACAATCTCCCTCCTAACCACCCTCCTCCTCGTAGTAATCACAGTCTACACACTCCGAAAACGAAAGCAGCACAAATCCTTGAGTTGGAAGCTCACCTTGTTCCGAAGTCTGAACTTCAAAGCTGACGACGTTCTCGAATGCCTAAAGGAAGAGAACATAATCGGAAAAGGCGGCGCAGGGATCGTGTACAGAGGGACCACCAGAGACGGTACAGACGTGGCAATTAAGAGACTAGTGGGCCAGGGTCGGAGCGGGCGGAACGATTACGGGTTCAAGGCGGAGATAGAGACGTTAGGGAGGATTAGGCACAGGAACATAGTGAGGCTGTTAGGGTACGTGTCGAACAAGGACACGAACTTGTTGGTTTATGAGTATATGAGTCATGGGAGCTTAGGGGAATGGCTTCATGGAGTGAAGGGAGGGCACTTACAGTGGGAGGCGAGGTACAAGATCGCGGTGGAGGCGGCGAAGGGACTGTGTTATCTTCACCATGATTGCTCGCCGGGGATCATACATAGGGATGTGAAGTCAAATAATATATTGTTGGATGCCGATTTTGAAGCTCATGTTGCTGATTTTGGATTGGCCAAGTTTCTTCTTGATCCTGGTGCTTCTCAATCCATGTCCTCCATTGCTGGCTCTTATGGCTACATCGCTCCAGAGTACGCATACACACTGAAAGTGGACGAGAAGAGCGACGTGTACAGCTTCGGTGTGGTGCTGCTGGAGTTGATAGTGGGGAGGAAACCAGTGGGTGAGTTCGGGGACGGCGTGGACATCGTGGGGTGGGTGAAGAAGACCACGTCGGAGCTACCTCCTCCGCCGTCGGCTGCCACCATGGTGATGGCGGTGGTGGACAACAGGCTGACAGGGTATCCTCTCACCGGCGTCATTCACATGTTCAAGATAGCGATGATGTGTGTGGAAGAGAATGGCAGCTGCAGGCCCACCATGAGAGAAGTCGTTCATATGCTCACCAATATCAATCCTCCTCCTCATCACTCTCCTCAAGATCTCATCCACCTCTAA 2946 0.4895 MRISTLCCIIPFLVCFLWYSSTLSSAYSDLDALLKLKASLKGPKASPSAMEDWKPSVSPSAHCKFSGVTCDDSFRVVSLNVSFHPLFGSIPPEIGLLDHLVSLTLSQDNLTGELPKQLANLSSLKVLNVSHNALTGNFPGEITLNMTQLEVLDVYDNSFNGTLPEEVVNLKNLKQLRLAGNYFSGEIPESYSEFESLEILKLNENSLRGKIPVSLVKLKNLRELYLGYSNAYQGGIPPELGTMSTLQLLDLGGCNLSGEIPPSLGNLKNAHTLFLQMNNLTGEIPPELSGMTSLMSLDLSINSLTGEIPSSFSELTNLTLINLYENKLRGPIPSFIGDLPNLEALQVWENNFSYILPQNLGSNGKFKFFDVATNHFTGLVPKDLCKGERLKTFILMNNSFDGPIPEQLGRCKSLEKVRISNNFLNGSIPPGLFNLPLVTMIDLSDNLLSGELPSDMSGDLIGILTFSNNLFTGKIPQAIGKLRSLQKLLLDLNHFVGEIPEEMFNLPMLTNVNISFNNLSGPIPKSVTHCASLTALDLSMNNLAGEIPRAINNIRDLSILNLSMNHLTGSIPEAIRDMVSLTTLDLSNNNLEGRIPTGGQFSVFSGESFAGNPKLCFPQDHFCKSNHKSPLKSTKIIVITISLLTTLLLVVITVYTLRKRKQHKSLSWKLTLFRSLNFKADDVLECLKEENIIGKGGAGIVYRGTTRDGTDVAIKRLVGQGRSGRNDYGFKAEIETLGRIRHRNIVRLLGYVSNKDTNLLVYEYMSHGSLGEWLHGVKGGHLQWEARYKIAVEAAKGLCYLHHDCSPGIIHRDVKSNNILLDADFEAHVADFGLAKFLLDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVKKTTSELPPPPSAATMVMAVVDNRLTGYPLTGVIHMFKIAMMCVEENGSCRPTMREVVHMLTNINPPPHHSPQDLIHL 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02418 981 Gene3D Ribonuclease Inhibitor 145 230 IPR032675 -
Accr1g02418 981 Gene3D Ribonuclease Inhibitor 231 330 IPR032675 -
Accr1g02418 981 SMART LRR_typ_2 578 601 IPR003591 -
Accr1g02418 981 SMART LRR_typ_2 291 315 IPR003591 -
Accr1g02418 981 SMART LRR_typ_2 146 170 IPR003591 -
Accr1g02418 981 SMART LRR_typ_2 339 363 IPR003591 -
Accr1g02418 981 SMART LRR_typ_2 435 459 IPR003591 -
Accr1g02418 981 SMART LRR_typ_2 121 145 IPR003591 -
Accr1g02418 981 SMART LRR_typ_2 482 506 IPR003591 -
Accr1g02418 981 SMART LRR_typ_2 243 267 IPR003591 -
Accr1g02418 981 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 764 - -
Accr1g02418 981 SMART serkin_6 687 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02418 981 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 979 - -
Accr1g02418 981 Gene3D Transferase(Phosphotransferase) domain 1 765 974 - -
Accr1g02418 981 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 146 230 - -
Accr1g02418 981 Gene3D Ribonuclease Inhibitor 28 144 IPR032675 -
Accr1g02418 981 FunFam Leucine-rich repeat receptor-like kinase 28 145 - -
Accr1g02418 981 Pfam Leucine Rich repeat 529 546 IPR001611 GO:0005515
Accr1g02418 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Accr1g02418 981 Pfam Leucine rich repeat 293 351 IPR001611 GO:0005515
Accr1g02418 981 SUPERFAMILY RNI-like 78 401 - -
Accr1g02418 981 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 231 335 - -
Accr1g02418 981 PANTHER RECEPTOR-LIKE PROTEIN 55 356 967 - -
Accr1g02418 981 Gene3D Ribonuclease Inhibitor 350 627 IPR032675 -
Accr1g02418 981 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Accr1g02418 981 Pfam Leucine Rich Repeat 580 596 IPR001611 GO:0005515
Accr1g02418 981 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515
Accr1g02418 981 FunFam LRR receptor-like serine/threonine-protein kinase EFR 336 629 - -
Accr1g02418 981 SUPERFAMILY Protein kinase-like (PK-like) 679 965 IPR011009 -
Accr1g02418 981 ProSiteProfiles Protein kinase domain profile. 687 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02418 981 Pfam Protein kinase domain 688 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02418 981 SUPERFAMILY RNI-like 348 602 - -
Accr1g02418 981 Gene3D Phosphorylase Kinase; domain 1 652 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02418 Accr-Chr1 59695003 59698237 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02418 26 970 Receptor kinase-like Gene Family AT1G75820 63.732 0.0 1235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr1g02418 PK_Tyr_Ser-Thr 4.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02418 - - lja:Lj3g3v3375770.1 1326.23