Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02390 ATGTCAACATCGTCATCCATGGAGTCTCTAGTTCTTAAGCTCTTTGAGATCTCAGCTGTCAAATTTGGAAACTTCAAACTCAAATCTGGCATCTCCTCACCAATTTATATAGACCTTCGCCTCATCATTTCATACCCTTCCCTCCTCCAGCAAATCTCCCAAATTCTAATTTCATCCGTGGCTTCTGCTTCATTTGACCTTGTGTGTGGGGTCCCTTACACTGCTCTTCCCATTGCCACTTGTGTCTCAACCACTAAAAACATCCCTATGGTCATGCGCCGCAAGGAAATCAAGGATTATGGCACTGCTAAAGCCATTGAGGGTGAATTCAAGCCCGGCCAAAGTTGCTTAATCATTGAAGACTTAGTTACCAGTGGCACATCAGTTTTGGAAACTGTTGCTCCACTGCGTGCTGCAGGGATGAATGTCAGTGATGCTGTTGTTCTAATTGATAGAGAGCAAGGTGGGAGAGAGAATTTAGAGGTGAATGGCATAAAGCTGCATTCAATTATAAAATTGACTGAAATGGTCAAAATTTTGAGGGAAAAAGGAAAGCTTGATGATGAGATTGTTGCGACTGTTATGAAATTTTTAGAGGAGAATCGCAAAGTTGCTGCTTTGGCAAAGGTGGAGAAGCCTGCCACTAGGGCCAAGGCTTTGTCATTTGAGGAGAGGGCGAAGCTGTCAAAGAATCCATCAGGAAAGAAACTGTTTGATATAATGGCTAAGAAGGAGAGTAATTTGTGTTTGGCTGCAGATGTTGGAACTGCAGCAGAATTGCTTGAAATTGCTGAGAAGGTGGGGCCTGAGATATGCCTGCTGAAAACTCATGTGGACATATTGCCAGATTTTACTCCTGATTTTGGCTCTAAGCTTCGCTCGATTGCAGAAAAATATAACTTCTTAATCTTTGAGGATCGGAAATTTGCTGACATTGGTAATACAGTAACAATGCAGTATGAAGGAGGGATCTTCTGTATATTGGATTGGGCCGATATAGTAAATGCCCACATTATCTCTGGTCCTGGAATTGTGGATGGATTGAAATTGAAGGGTTTGCCGCGTGGTAGGGGTCTCTTGCTGCTTGCCGAAATGAGTTCTGCCGGTAATCTCGCCAAGGGAGATTATACTGCTGCGGCTGTGAAAATTGCAGAGGATCATTCTGATTTTGTTATTGGCTTCATCTCTGTCAATCCAGCATCATGGCCAGGGGCACCCATAAATCCTTCATTCATTCAGGCAACTCCTGGCGTTCAGATGGTGACTGGTGGTGATGCTTTGGGACAACAATATAACACACCATATTCTGTGATACATGATAGAGGAAGTGACATCATAATAGTGGGACGTGGCATCATCAAAGCAGCTGATCCGGCTGAAACGGCTCGTGAATACCGTCTTCAAGGATGGAATGCATATTTGGCCAAGTGCAATTGA 1437 0.437 MSTSSSMESLVLKLFEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLQQISQILISSVASASFDLVCGVPYTALPIATCVSTTKNIPMVMRRKEIKDYGTAKAIEGEFKPGQSCLIIEDLVTSGTSVLETVAPLRAAGMNVSDAVVLIDREQGGRENLEVNGIKLHSIIKLTEMVKILREKGKLDDEIVATVMKFLEENRKVAALAKVEKPATRAKALSFEERAKLSKNPSGKKLFDIMAKKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLRSIAEKYNFLIFEDRKFADIGNTVTMQYEGGIFCILDWADIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDALGQQYNTPYSVIHDRGSDIIIVGRGIIKAADPAETAREYRLQGWNAYLAKCN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02390 478 CDD OMP_decarboxylase_like 248 465 - -
Accr1g02390 478 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 246 465 IPR001754 GO:0004590|GO:0006207
Accr1g02390 478 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 303 316 IPR018089 GO:0004590|GO:0006207
Accr1g02390 478 NCBIfam orotidine-5'-phosphate decarboxylase 248 466 IPR014732 GO:0004590|GO:0044205
Accr1g02390 478 SUPERFAMILY PRTase-like 7 198 IPR029057 -
Accr1g02390 478 NCBIfam orotate phosphoribosyltransferase 14 175 IPR004467 GO:0004588
Accr1g02390 478 SMART OMPdecase_2 247 465 IPR001754 GO:0004590|GO:0006207
Accr1g02390 478 SUPERFAMILY Ribulose-phoshate binding barrel 220 474 IPR011060 -
Accr1g02390 478 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 234 IPR023031 GO:0004588|GO:0006221
Accr1g02390 478 FunFam Uridine monophosphate synthetase 217 478 - -
Accr1g02390 478 Gene3D - 1 211 IPR029057 -
Accr1g02390 478 Gene3D Aldolase class I 216 478 IPR013785 -
Accr1g02390 478 CDD PRTases_typeI 65 172 IPR000836 -
Accr1g02390 478 FunFam Uridine monophosphate synthetase 3 207 - -
Accr1g02390 478 Pfam Phosphoribosyl transferase domain 53 158 IPR000836 -
Accr1g02390 478 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 3 477 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02390 K13421 - gmx:100807008 796.578