Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02382 ATGGCCCAGCAACCCTCGATTTCCTCTTCCTTCTCTTATGGATGGACTTATGATGTATTTATCAATTTCAGAGGTGAAGATACTCGCTTTGATTTTGCTAGAAACCTCTACGAGGCTTTACAACAAAAAGGTATCCATACTTTTTTAGACAATGAAAGGATTAGAAAAGGAGAAAAGATTACGCCATCACTTCTCAAAGCAATCCGAGAGTCTAGAATGGCTATTACTATTTTCTCTAGAAACTATGCTTCCTCTACATTTTGCTTAGATGAGCTCGTTCAGATCCTTGAGCATATAAACAAAAAAGGTAGACTGGTTCTGCCCATTTTTTATGGCGTGGATCCATCGGAAGTACGACATCAAAGGAACAATTATGGTGAAGTATTTGCTCAGCATGAGAGGAGGTTTAAAAATGACAAGGAGAAGGTGCGAAAATGGAGGCAGGCTCTACAAGATGCTGCTAGTCTCTCGGGTCTCCGTTTTGAACCTGGGTATCAATACGAACATGCTTTTATCAAAGCTATTGCAAAAGAGGTCACTAGGAGAATTAACCGCAAGCCTTTACACATTGCTGATTATCCACTTGGACTTGAGGATCGAATGCAGAAAGTAAATTCTCTTCTCGATGTTGAGTCTAATGAAGGGGTGCGAATGGTAGGAATATGTGGCACTGGTGGAATAGGAAAATCAACAATTGCTCGAGCAGTTTGCAGTTCGATTGTGGACTCGTTTGAAGGCTTTTGTTTCCTTGCTGATGTTAGAGAAAATACAGTTAATCATGGTCTAGTATATGTCCAGGAAATGCTTCTTTCTGAAGTGTTGGAGGAGGACATTAAGGTAAGAGATGTTAATAAAGGAATTCCGATAATAAAGCAGAGGCTCCACAAAAAGAAGGTTCTTCTTGTTCTTGATGATGTTGATAAGCTAAAGCAATTACAAGCAATTGCTGGGGGACTTGATTGGTTTGGTTCTGGTAGTAGGATCATTGTAACAACAAGGGATAAGCATTTACTAGCAAGACATGGTGTTGAAAGAATTTATGAGGTAGACTGTTTAAATAGACAAGAAGGTCTTGAATTGCTTAAATGGCATGCCTTTAAACAAAGAAGAGTTGATGCAAGTTACATTGACGTTTTAAACAATGTAGTACTCTATGCTTGTGGTCTTCCATTGGCTTTAGAAATTATAGGATCCAACTTGTTCAATAGAGAAATAAATGATTGGAATTCTGCATTAGAGAGTTATCAGAGCATTCCTATTAAAGAGATCCAACAAATTCTGAAGGTAAGCTATGACGCTTTGGAGGAAAACGAGCAGGAAATTTTCCTTGACATTGCTTGTTGCTTTAAAGGTGACAGTTTTGAATATGTAAGAAGTGCTTTGTGTGCACGTGGTATATGCCCAGATTATGGTGTTAAAGTGTTGATTGATAAATGTCTCATAAAGATTAATCATGGTAAGGTGACTATGCATGACTTGATTCAAGCCATGGGTAAGGAAATTGTGCGACAGAAATCACCATATAACCCTGGAAAACGCACTAGGTTATGGTTTCATAAAGACATCCTTCACGTTTTAGAAGAAAACAAGGGTTCTGGGAAGATTGAAGCCATAAATCTAGACATGCCTGGAGATATAGTGATTGATTGGAGTGGAAAGGCCTTCAAAAAGATGTCAAATCTTAAGATGCTCATTATCAGAAATGCACATTTTTCTATAGGTCCCAAGTATCTGCCCAACAGTTTAAGAGTGTTGGATTGGACGGGATATCCTTTTTCATATTTACCTTCTGATTTTAACCCCAAGGAACTAATCATCCTCAAAATGCCAGAAAGTTTCCTCAAACGAGATGTACTTCTCAAGGCATGCAGGAAGTTTCAGTCTCTGAGTGTGATGAATTTCAGAGGTTGCAAATTTTTAAGACAAGTTTCAGACTTATCTGCGGTCCCAGATTTGAGGGAATTGTGTTTGGACGGCTGCACCAAGTTAAATGAAGTTCATGGGTCAATTGGATTTCTTGGTAAACTTAAAAGGTTGGGTGTTCGAAACTGCAGGAAGCTCAAGACTTTCCCAAGTATCAAGTTAACATCCTTAGAGTTTCTCAACCTCTCAGGGTGCTCCGGCCTCACAAGATTTCCAGAAATATTAGGAACCATGGAAAATATCAAAGATGTCTGTTTGGACTTTAGTGGCATAGAAGACTTACCTTTGTCATTCAAAAGCCTTGTTACATTAGAAAAATTAAAACTTTCATGTTGTAGAAGTATTGAAAAAATTGGAGGTATTCCACCAAACCTAAAAGAATTGTCAGCAATAAACCTTGATTGGTACTCACACCTAAGCTTAGAGTCTCGTCACATTTTGCTATGTCAGGCTTTACATGAGGTTGATGGCTTGAAATTCATTGTAGAAGAAGATAAGGCCCCAGAATGGCTTGACCACTATGTTGAGGGAGATTCATGTTCTTTTTGGTTCCAAAACGAATTCCCAAACATGGCTGTATGTTTTGGTGCACTAATAGAGGACATATGGCACTCACCCCCAAAAATGCTTATTGACGTCCGAGTTAATGGCACAGATGTTGGATTGCCAGAAGGGCAAACAATTTTTGCGCCACTTTCAACACCCCATGTCTTTTTGTTTGATTTGCGACGGCTTTTTTTTGAGGATAAACTGAAAAGTGTAGTTTCAGAGCGTGGATGGAACCACGTGGACATATCATTTGTATTGATTTACATAAATTGCCCCCATCCAGTGGAATCAGATATATCATATGTTATGGCTAGGGCAAAATGGAGTGGAGCTTATGTATACAGGAAAAAATCCAGAATGGAAGATATTCAATTCATAAACCATAGCCAGGAAGCAGTACCTGAGTTATTGAAAGAATCTTCCATGAATCCTGTAGACGGTTTTGCTGAGCTTGTCCCGCGTAGAATGAAGTGGCCTCACACTGAATCTCATTCAGTCACTGGAAGAGAGACTAATATGAGAAAAAGAAAGGGGTGGGAGAGCTCTATCAATATGGGTCCCACCTGCTCCCACTCATTTTCTTCAGACATCATTTTCCCCCTTGGATGA 3081 0.3921 MAQQPSISSSFSYGWTYDVFINFRGEDTRFDFARNLYEALQQKGIHTFLDNERIRKGEKITPSLLKAIRESRMAITIFSRNYASSTFCLDELVQILEHINKKGRLVLPIFYGVDPSEVRHQRNNYGEVFAQHERRFKNDKEKVRKWRQALQDAASLSGLRFEPGYQYEHAFIKAIAKEVTRRINRKPLHIADYPLGLEDRMQKVNSLLDVESNEGVRMVGICGTGGIGKSTIARAVCSSIVDSFEGFCFLADVRENTVNHGLVYVQEMLLSEVLEEDIKVRDVNKGIPIIKQRLHKKKVLLVLDDVDKLKQLQAIAGGLDWFGSGSRIIVTTRDKHLLARHGVERIYEVDCLNRQEGLELLKWHAFKQRRVDASYIDVLNNVVLYACGLPLALEIIGSNLFNREINDWNSALESYQSIPIKEIQQILKVSYDALEENEQEIFLDIACCFKGDSFEYVRSALCARGICPDYGVKVLIDKCLIKINHGKVTMHDLIQAMGKEIVRQKSPYNPGKRTRLWFHKDILHVLEENKGSGKIEAINLDMPGDIVIDWSGKAFKKMSNLKMLIIRNAHFSIGPKYLPNSLRVLDWTGYPFSYLPSDFNPKELIILKMPESFLKRDVLLKACRKFQSLSVMNFRGCKFLRQVSDLSAVPDLRELCLDGCTKLNEVHGSIGFLGKLKRLGVRNCRKLKTFPSIKLTSLEFLNLSGCSGLTRFPEILGTMENIKDVCLDFSGIEDLPLSFKSLVTLEKLKLSCCRSIEKIGGIPPNLKELSAINLDWYSHLSLESRHILLCQALHEVDGLKFIVEEDKAPEWLDHYVEGDSCSFWFQNEFPNMAVCFGALIEDIWHSPPKMLIDVRVNGTDVGLPEGQTIFAPLSTPHVFLFDLRRLFFEDKLKSVVSERGWNHVDISFVLIYINCPHPVESDISYVMARAKWSGAYVYRKKSRMEDIQFINHSQEAVPELLKESSMNPVDGFAELVPRRMKWPHTESHSVTGRETNMRKRKGWESSINMGPTCSHSFSSDIIFPLG 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02382 1026 Gene3D - 351 435 IPR042197 -
Accr1g02382 1026 Pfam TIR domain 17 183 IPR000157 GO:0007165
Accr1g02382 1026 Gene3D Ribonuclease Inhibitor 548 693 IPR032675 -
Accr1g02382 1026 Gene3D Ribonuclease Inhibitor 694 788 IPR032675 -
Accr1g02382 1026 SMART AAA_5 215 352 IPR003593 GO:0016887
Accr1g02382 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Accr1g02382 1026 SUPERFAMILY L domain-like 509 782 - -
Accr1g02382 1026 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Accr1g02382 1026 SMART till_3 16 156 IPR000157 GO:0007165
Accr1g02382 1026 Gene3D - 13 180 IPR035897 -
Accr1g02382 1026 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 760 IPR044974 GO:0006952
Accr1g02382 1026 PRINTS Disease resistance protein signature 218 233 - -
Accr1g02382 1026 PRINTS Disease resistance protein signature 293 307 - -
Accr1g02382 1026 PRINTS Disease resistance protein signature 386 400 - -
Accr1g02382 1026 PRINTS Disease resistance protein signature 693 709 - -
Accr1g02382 1026 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Accr1g02382 1026 Pfam NB-ARC domain 198 435 IPR002182 GO:0043531
Accr1g02382 1026 Gene3D - 181 345 IPR027417 -
Accr1g02382 1026 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Accr1g02382 1026 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02382 Accr-Chr1 59342923 59347234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02382 11 774 WRKY Transcription Factor Family AT4G12020 32.824 1.75e-92 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02382 - - pcin:129295008 1136.71