Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02350 ATGGAAGACAAACATCCTCAACATCAAGACCCTCCTCCTCCTTCGGCTCTCCCTAACTATCATCACGATCATATCGATCCCGTCAAAGAAGAATCCCCCAGAAAACCCGTGGCCACCGCCGGTGGAGATAGGTTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCGACGCTTTTGGAGGCGTACGAATCCAAATGGGTGCTCCGTAACAGAGCCAAGCTCAAGGGCCATGACTGGGAGGACGTCGCCAGGCACGTTTCTTCACGCGCCAACTGTACCAAGTCTGCTAAGACCCAGACTCAGTGCAAGAACAAGATCGAGTCCATGAAGAAACGGTACCGTTCTGAATCGGCCTCCGGGGATGCGTCTTCGTCTTGGCCGTTGTATTCTCGTCTTGATCTTCTCCTGCGTGGGACTGGGCCTACTCCGTCCACCACGACGCTCGCCGTGCCACTTGCGGCGGCCCCAGCGGCACCGGCACCGGTACAGTCACCGTCTCAGTCTACACATCACGGGAATAACCAGGGTTTTGTGTTGTTGGAGCCTTCGTTGGCGGTGGCTCAGCTTCATCATCAACCACAGCCGCTTCCGGTGGCCGCCGGTTCTCCTCCTCCGCTTCCCAACGCTCCAAACTCTCATGGATCCAACGGTATTGGCAGGTTAGCCAAGGAACAGGAAGATGGATTAGGAACGAACAAGTCATCAGATCAGGTGTCCAACAAGAACATGAATGAAATTATGGACACAGATAGCAGCACACCAGCACTTTATAGCCATTCAAAGGAGCACCCAACAAGAAGCAACAACAATAACAACAAGAAGAGGAAGATGAAGATGGATCATCGAAGCAACACGAAGAAGATGAAGAGAAAGAGTGAAGAAGGGAAGATTAATGAGATGGGGATAGCAGAGAGCATAAGGTGGCTTGCAGAGGTGGTGGTGAGATCAGAGCAAGCAAGGATGGAGATGATGAAGGAGATCGAGAAGATGAGGGTCGAGGCAGAGGCCAAGAGAGGAGAAATGGATCTCAAAAGAACTGAGATAATTGCTAATACCCAGCTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAATAAAGGTGTTGATTCCTCACTAAGAATTGGTAGGAATTAA 1134 0.5079 MEDKHPQHQDPPPPSALPNYHHDHIDPVKEESPRKPVATAGGDRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANCTKSAKTQTQCKNKIESMKKRYRSESASGDASSSWPLYSRLDLLLRGTGPTPSTTTLAVPLAAAPAAPAPVQSPSQSTHHGNNQGFVLLEPSLAVAQLHHQPQPLPVAAGSPPPLPNAPNSHGSNGIGRLAKEQEDGLGTNKSSDQVSNKNMNEIMDTDSSTPALYSHSKEHPTRSNNNNNKKRKMKMDHRSNTKKMKRKSEEGKINEMGIAESIRWLAEVVVRSEQARMEMMKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRN 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02350 377 MobiDBLite consensus disorder prediction 231 265 - -
Accr1g02350 377 MobiDBLite consensus disorder prediction 194 294 - -
Accr1g02350 377 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 363 IPR044823 -
Accr1g02350 377 MobiDBLite consensus disorder prediction 270 285 - -
Accr1g02350 377 Coils Coil 320 340 - -
Accr1g02350 377 Gene3D - 50 115 - -
Accr1g02350 377 Pfam Myb/SANT-like DNA-binding domain 47 134 IPR044822 -
Accr1g02350 377 MobiDBLite consensus disorder prediction 22 50 - -
Accr1g02350 377 MobiDBLite consensus disorder prediction 1 50 - -
Accr1g02350 377 FunFam Trihelix transcription factor ASIL2 50 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02350 Accr-Chr1 58796160 58798750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02350 39 359 Trihelix Transcription Factor Family AT3G14180 25.714 8.81e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr1g02350 Myb_DNA-bind_4 4.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02350 - - qsa:O6P43_001534 373.244