Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02346 ATGTTCTCGGCGTCCCTCGATACGACGTTGACTTGTCCCAAGTGTCGCCATGTGTCTAATGTCGGGAACTCTGTTCAATCTCTTCGCAAGAACTACGCCGTTCTCGCGCTCATCCACTCAGCTTCGAATGCAACCCGGTCGACTTTCGACGGAGACTTTACTGACGATGAAGAAGACGGTGACAATGACGATGATTCTACCATATTCAGTCGTCGGGGGTCCCAGACGTCGAGCTCAGGCAGGTGTGGACCTGTGATCGAGGTTGGAGTTCACCAGGAATTAAACTTTCTACGGCGGATAGGTGAGGGGAGGCGGGCCGGAGTTGAAACGTGGACGGCGGTGCTCAGTGGAGGCGGCAGAAGTGGACAGTGCAGGCACTATGTAGCGGTGAAGAAGGTAGGGATAACAGAGGAGATGAATTTAAATTGGGTGCGTGAACAGCTTGAGAATTTGCGCCGTACATCGATGTGGTGTAGAAATGTGTGCACGTTTCATGGGGTTATGGAGGTGGACAAGAGTTTGTGTCTTGTGATGGACCGGGGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAATGAGGGGAGACTCACTTTGGAGCAAGTCCTAAGGTATGGGGCTGACATTGCACGAGGTGTGGCTGAGCTTCATGCTGCAGGTATTGTTTGCATGAATCTAAAGCCATCCAATCTTCTTCTTGATGCAAATGGTCATGCAGTGGTTTCTGATTACGGACTTGCTGGAATTCTGAAGAAGCCTTCCTGTTGGAAGGCCCAACCAGAGTGTGACCCGTCAAGGATCCATTCATGTATGGAATGTATGATGCTCAGCCCACATCATTCAGCTCCAGAGGTTTGGGAGCCTGTGAAGAGGTCAAATTTATTCAGGGCTGATTCAATAGGTGTATCCAAAGAATCAGATGCTTGGAGTTTTGGTTGTACTTTGGTGGAAATGTGCACGGGTTTTGTTCCTTGGGCTGGTCTAAGTGCGGAGCAAATTTATCAAGCCATTGTCAAGGGACGGAAATTGCCTCCACAGTATGCTTGTATTGTTGGTGGTGGAATACCTAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGACCTAGTTTTAGCGCAATGTTAGCTACATTTCTCCATCATTTGCAGGAAATACCATACAGTCCTGCTGCAAGCCCTGATAAGGATTCTGTTGAATGCTCTGTGTCAACTGTGCTAGAAGCTTCCGCTCAAGCACTTGAATTGAAAATTCCTCAAGATTATGCAAACCATCTTCATCGGCTTGTATCTGAAGGGAATGTTCGGGGTGTTAGACATCTCCTTGTAAAGGCTGTCTCAGTAAATGGTAGCAACTACATATCTTCTCTATTGGAAGCTCAAAATGCTGATGGGCAGACTGCTCTCCACTTGGCTTGTAGGCGTGGCAGTGCAGAACTTGTTGAGGCTATTTTGGCATGCAAAGAGGCAGATGCTGATGTCTTGGACAAAGATGGAGTTCCTTCACTTGCTTTTGCTTTAGCAGCTGGATCTCCAGAATGTGTTCGTAGTCTAATCAAAAGAAATGCTAATGTGAGGTCTGGATTAGGAGATGGCTTTGGCCCATCTATTGCTCACATTTGTGCCTATCATGGCCAACCAGAGTGCATGCGAGAACTGTTATTGGCTGGAGCTGATCCAAATGCAGTTGATGACCAAGGTGAATCTATATTGCATTGTGCAGTAGCCAAGAAGTATACAGATTGTGCTCTAGTGATACTTGAAAATGGGGGCTGCAGATCAATGGCGATCATAAATCCAAAGAATATGACACCATTGCACCTGTGTGTGGAAACATGGAATGTGGCTGTTGTAAAAAAATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAACCCCATTGGCACTGCATTGTGCATGGCAGCTGCATCTAAGAAAGATCATGCAATTGAGGGGAGGGAACTGGTTCGAATATTGCTTGCTGCAGGTGCTGACCCATCTGCTCAAGATTCACAGTATGGGTGTACAGCTTTGCATACGGCTGTCAAATCTAATGATGTTGAGCTGGTTAAAGTTATCCTTGCTGCTGGTGTTGATGTGAACATTCGTAATGAGCAAAATAGTACGCCTCTTCACTTGGCTTTAACTAGTGGAGCAAAGTCATGTGTTAAATTGCTTCTATCTGCTGGGGCGGATTATAATTTGCTGGATGATGACGGTGACAATGCTTTGCACAAAGCAGCAAAGGCAGCAAAATCAGCACGTGAAAACCTTGACTGGCTCATTGTTATGCTAAGAAATCCTGATGCTGATGTTCATGTCAGAAACCACAGTGGAAGGACGCTACGTGACATATTGCAGGCCCTTCCCCGGGAATGGATATCTGAGGATCTGATGGAAGCACTTTTGTATAGAGGAGTTCATCTAACTCCTACAATGTTTGAAGTGGGAGATTGGGTGAAGTTCAAAAGAACTGTCACAACTCCAACTTATGGATGGCAATGTGCTAGCTCAAGGAGCGTTGGCTTTGTGCAAAATGTCCCAAGCAGAGACAATCTCATTGTTTCTTTTTGTTCTGGAGACGCCCATGTTTTAGCAAATGAAGTTGTGAAAGTTATTCCATTAGACAGGGGTCAACATGTACAGCTTAAATCAGAAGTTACAGAGCCCAGGTTTGGTTGGCGTGAACAGTCACGTGACAGAATAGGCACAGTATTATGCATTGACGATGATGGAATCCTACGTGTTGGGTTTCCAGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGCAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGCATTCGTCCAACTCTTACTTCTACTAAGCATGGCTTAGGATCTGTGACACCAGGAAGCATTGGTATTGTATCTTCTATCAGGCCAGACAGTAGCCTGCTGATAGAACTCAGCTATCTTGCAACTCCATGGCATTGTGAGCCAGAAGAGGTTGAGCATGTTGCTCCCTTCAGGGTAGGAGATCGTGTATGTGTGAAGCGATCTGTTGCAGAGCCCAGGTGTGCTTGGGGAGGTGAGAGTCATCATAGTGTTGGAAGAATCAGTGAGATTGAGAATGATGGTCTCTTAATAATTGATATACCAAACCGACCAATACCCTGGCAAGCTGATCCATCTGATATGGAGAAGCTGGAAGATTTTAAGGTTGGAGATTGGGTCAAAATAAAATCTTCAGTTCCTTCCCCGAGATATGGATGGGATGATGTTACTAGGAGTAATATTGGGGTAATCCATAGCTTGGAGGAAGACGGTGATATGGGTATTGCTTTCTGTTTCAGAAGTAAACCTTTTCGTTGCTCTGTCACTGATGTGGAGAAAGTGCCACCTTTAGAGGCAGGGCAAGAAATTCATGTGATGCCATCTGTTACCCAGCCTCGACTTGGATGGTCAAATGAATCACCAGCTACCGTTGGAAAAATAGTGACAATTGACATGGATGGTGCTCTCAATGTGAGAGTCACAGGCAGGCAGAGCCTGTGGAAAGTTTCTCCTGGAGATGTAGAACAACTTTCAGGATTTGAAGTTGGTGATTGGGTACGTTCAAAACCAAGCATAGGAACCAGACCAAGTTATGATTGGAATGGTGCTGTGAAGGATGGTATAGCTGTTGTACACAGTGTACAGGATTCTGGATACTTGGAATTGGCTTGCTGTTTTCGTAAACAGAGGTACTTGGCTCATTATACAGATATTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGAGGTGCTCAGGCTAAATCTCAAGGCGTTTTAACCAGCATTCATGCTGATGGAGAAGTAAGAGTATTATTCTCTGGTTTGCCGGGTTTATGGAGAGGAGATCCTGCTGACCTTGAGATTGAGCAGATGTTTGAAGTGGGGAAGTGGGTAAGGTTGAAAGATAATGCAAACAATTGGAAATCGATTGTACCAGGCAGCATTGGTATAGTACAAGGAATAGGATTTAATGGTGATGAATGGGATGGAAGCACTTGTGTTGGCTTTTGTGGGGAGCAAGAAAGTTGGGTCGGACCAACTTCACATCTTGAAAGAGTTGACACACTGTCTGCTGGGCAGAAGGTTAGAGTTAAGCAGACCATAAAGAATCCAACATTCGGTTGGGCAGGGCACACCCATGCTGATGTTGGAACCATATCAGCAATTGATGCTGATGGAAAGCTTCGAATATACACTCCACCAGGATCAAAACCATGGATGTTGGACCCATCAGAAGTAGTATTAGTGGAGGAGGAGGAGATACAAATCGGAGATTGGGTGAAGGTCAGAGCATCAGTTTCAACCCCAACCCACCAATGGGGAGAAGTGGGTCACTCAAGCATCGGGGTGGTACATCGGATGGAAGGCGAGGATCTTTGGGTGTCATTCTGTTTCATGGAGAGGCTATGGCTTTGTAAGGCATGGGAAATGGAAAGGGTTAGGCCATTCATAATTGGGGACAAGGTAAGGATCAGAGAAGGACTTGTGAGTCCAAGGTGGGGATGGGGAATGGAGACACATGCTAGCAAGGGAGAGGTGGTAGGGGTAGACGCTAACGGAAAACTAAGGATAAAATTCAGGTGGAGGGAAGGGAAGCCTTGGGTGGGAGACCCTGCTGATATTGTTCTTGATGACAAGTGA 4746 0.461 MFSASLDTTLTCPKCRHVSNVGNSVQSLRKNYAVLALIHSASNATRSTFDGDFTDDEEDGDNDDDSTIFSRRGSQTSSSGRCGPVIEVGVHQELNFLRRIGEGRRAGVETWTAVLSGGGRSGQCRHYVAVKKVGITEEMNLNWVREQLENLRRTSMWCRNVCTFHGVMEVDKSLCLVMDRGYGSVQSEMQRNEGRLTLEQVLRYGADIARGVAELHAAGIVCMNLKPSNLLLDANGHAVVSDYGLAGILKKPSCWKAQPECDPSRIHSCMECMMLSPHHSAPEVWEPVKRSNLFRADSIGVSKESDAWSFGCTLVEMCTGFVPWAGLSAEQIYQAIVKGRKLPPQYACIVGGGIPRELWKMIGECLQFKPSKRPSFSAMLATFLHHLQEIPYSPAASPDKDSVECSVSTVLEASAQALELKIPQDYANHLHRLVSEGNVRGVRHLLVKAVSVNGSNYISSLLEAQNADGQTALHLACRRGSAELVEAILACKEADADVLDKDGVPSLAFALAAGSPECVRSLIKRNANVRSGLGDGFGPSIAHICAYHGQPECMRELLLAGADPNAVDDQGESILHCAVAKKYTDCALVILENGGCRSMAIINPKNMTPLHLCVETWNVAVVKKWVEVATSDEIAEAIDIPNPIGTALCMAAASKKDHAIEGRELVRILLAAGADPSAQDSQYGCTALHTAVKSNDVELVKVILAAGVDVNIRNEQNSTPLHLALTSGAKSCVKLLLSAGADYNLLDDDGDNALHKAAKAAKSARENLDWLIVMLRNPDADVHVRNHSGRTLRDILQALPREWISEDLMEALLYRGVHLTPTMFEVGDWVKFKRTVTTPTYGWQCASSRSVGFVQNVPSRDNLIVSFCSGDAHVLANEVVKVIPLDRGQHVQLKSEVTEPRFGWREQSRDRIGTVLCIDDDGILRVGFPGASRGWKADPAEMQRVEEFKVGDWVRIRPTLTSTKHGLGSVTPGSIGIVSSIRPDSSLLIELSYLATPWHCEPEEVEHVAPFRVGDRVCVKRSVAEPRCAWGGESHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKLEDFKVGDWVKIKSSVPSPRYGWDDVTRSNIGVIHSLEEDGDMGIAFCFRSKPFRCSVTDVEKVPPLEAGQEIHVMPSVTQPRLGWSNESPATVGKIVTIDMDGALNVRVTGRQSLWKVSPGDVEQLSGFEVGDWVRSKPSIGTRPSYDWNGAVKDGIAVVHSVQDSGYLELACCFRKQRYLAHYTDIEKVPCFKVGQYVRFRTGLVEPRWGWRGAQAKSQGVLTSIHADGEVRVLFSGLPGLWRGDPADLEIEQMFEVGKWVRLKDNANNWKSIVPGSIGIVQGIGFNGDEWDGSTCVGFCGEQESWVGPTSHLERVDTLSAGQKVRVKQTIKNPTFGWAGHTHADVGTISAIDADGKLRIYTPPGSKPWMLDPSEVVLVEEEEIQIGDWVKVRASVSTPTHQWGEVGHSSIGVVHRMEGEDLWVSFCFMERLWLCKAWEMERVRPFIIGDKVRIREGLVSPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGKPWVGDPADIVLDDK 1581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02346 1581 Gene3D Transferase(Phosphotransferase) domain 1 88 389 - -
Accr1g02346 1581 Pfam Mind bomb SH3 repeat domain 824 942 IPR040847 -
Accr1g02346 1581 Pfam Mind bomb SH3 repeat domain 1200 1321 IPR040847 -
Accr1g02346 1581 Pfam Mind bomb SH3 repeat domain 948 1068 IPR040847 -
Accr1g02346 1581 Pfam Mind bomb SH3 repeat domain 1457 1575 IPR040847 -
Accr1g02346 1581 Pfam Mind bomb SH3 repeat domain 1074 1194 IPR040847 -
Accr1g02346 1581 Pfam Mind bomb SH3 repeat domain 1327 1448 IPR040847 -
Accr1g02346 1581 Gene3D - 600 722 IPR036770 -
Accr1g02346 1581 MobiDBLite consensus disorder prediction 48 83 - -
Accr1g02346 1581 ProSiteProfiles Protein kinase domain profile. 94 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02346 1581 SUPERFAMILY Ankyrin repeat 463 791 IPR036770 -
Accr1g02346 1581 ProSiteProfiles Ankyrin repeat region circular profile. 468 489 - -
Accr1g02346 1581 Pfam Protein kinase domain 125 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02346 1581 ProSiteProfiles Ankyrin repeat profile. 716 748 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 605 636 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 425 454 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 468 498 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 502 531 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 643 678 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 683 712 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 749 784 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 537 566 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 570 601 IPR002110 GO:0005515
Accr1g02346 1581 SMART ANK_2a 716 745 IPR002110 GO:0005515
Accr1g02346 1581 Gene3D - 403 599 IPR036770 -
Accr1g02346 1581 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1580 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Accr1g02346 1581 ProSiteProfiles Ankyrin repeat profile. 468 501 IPR002110 GO:0005515
Accr1g02346 1581 SUPERFAMILY Protein kinase-like (PK-like) 93 393 IPR011009 -
Accr1g02346 1581 PRINTS Ankyrin repeat signature 469 484 IPR002110 GO:0005515
Accr1g02346 1581 PRINTS Ankyrin repeat signature 732 746 IPR002110 GO:0005515
Accr1g02346 1581 ProSiteProfiles Ankyrin repeat profile. 683 715 IPR002110 GO:0005515
Accr1g02346 1581 Pfam Ankyrin repeats (3 copies) 661 746 IPR002110 GO:0005515
Accr1g02346 1581 Pfam Ankyrin repeats (3 copies) 543 622 IPR002110 GO:0005515
Accr1g02346 1581 Pfam Ankyrin repeats (3 copies) 430 529 IPR002110 GO:0005515
Accr1g02346 1581 ProSiteProfiles Ankyrin repeat profile. 537 569 IPR002110 GO:0005515
Accr1g02346 1581 ProSiteProfiles Ankyrin repeat region circular profile. 716 748 - -
Accr1g02346 1581 ProSiteProfiles Ankyrin repeat region circular profile. 683 715 - -
Accr1g02346 1581 Gene3D - 723 822 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02346 Accr-Chr1 58703938 58713158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02346 102 386 MAP Kinase Kinase Kinase AT4G08470 28.028 1.61e-17 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Accr1g02346 Pkinase 1.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02346 K16279 - gmx:100777576 2603.93