Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02345 ATGAAAGTTCCTTGTTGTTCGGTTTGCCAAACACGGTACAACGAGGAGGAGAGAGTCCCTCTTCTGCTCCAATGCGGGCATGGGTTTTGCAGAGAATGTTTATCGAGAATGTTCTCGGCGTCCCTCGATACGACGTTGACTTGTCCCAAGTGTCGCCATGTGTCTAATGTCGGGAACTCTGTTCAATCTCTTCGCAAGAACTACGCCGTTCTCGCGCTCATCCACTCAGCTTCGAATGCAACCCGGTCGACTTTCGACGGAGACTTTACTGACGATGAAGAAGACGGTGACAATGACGATGATTCTACCATATTCAGTCGTCGGGGGTCCCAGACGTCGAGCTCAGGCAGGTGTGGACCTGTGATCGAGGTTGGAGTTCACCAGGAATTAAACTTTCTACGGCGGATAGGTGAGGGGAGGCGGGCCGGAGTTGAAACGTGGACGGCGGTGCTCAGTGGAGGCGGCAGAAGTGGACAGTGCAGGCACTATGTAGCGGTGAAGAAGGTAGGGATAACAGAGGAGATGAATTTAAATTGGGTGCGTGAACAGCTTGAGAATTTGCGCCGTACATCGATGTGGTGTAGAAATGTGTGCACGTTTCATGGGGTTATGGAGGTGGACAAGAGTTTGTGTCTTGTGATGGACCGGGGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAATGAGGGGAGACTCACTTTGGAGCAAGTCCTAAGGTATGGGGCTGACATTGCACGAGGTGTGGCTGAGCTTCATGCTGCAGGTATTGTTTGCATGAATCTAAAGCCATCCAATCTTCTTCTTGATGCAAATGGTCATGCAGTGGTTTCTGATTACGGACTTGCTGGAATTCTGAAGAAGCCTTCCTGTTGGAAGGCCCAACCAGAGTGTGACCCGTCAAGGATCCATTCATGTATGGAATGTATGATGCTCAGCCCACATCATTCAGCTCCAGAGGTTTGGGAGCCTGTGAAGAGGTCAAATTTATTCAGGGCTGATTCAATAGGTGTATCCAAAGAATCAGATGCTTGGAGTTTTGGTTGTACTTTGGTGGAAATGTGCACGGGTTTTGTTCCTTGGGCTGGTCTAAGTGCGGAGCAAATTTATCAAGCCATTGTCAAGGGACGGAAATTGCCTCCACAGTATGCTTGTATTGTTGGTGGTGGAATACCTAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGACCTAGTTTTAGCGCAATGTTAGCTACATTTCTCCATCATTTGCAGGAAATACCATACAGTCCTGCTGCAAGCCCTGATAAGGATTCTGTTGAATGCTCTGTGTCAACTGTGCTAGAAGCTTCCGCTCAAGCACTTGAATTGAAAATTCCTCAAGATTATGCAAACCATCTTCATCGGCTTGTATCTGAAGGGAATGTTCGGGGTGTTAGACATCTCCTTGTAAAGGCTGTCTCAGTAAATGGTAGCAACTACATATCTTCTCTATTGGAAGCTCAAAATGCTGATGGGCAGACTGCTCTCCACTTGGCTTGTAGGCGTGGCAGTGCAGAACTTGTTGAGGCTATTTTGGCATGCAAAGAGGCAGATGCTGATGTCTTGGACAAAGATGGAGTTCCTTCACTTGCTTTTGCTTTAGCAGCTGGATCTCCAGAATGTGTTCGTAGTCTAATCAAAAGAAATGCTAATGTGAGGTCTGGATTAGGAGATGGCTTTGGCCCATCTATTGCTCACATTTGTGCCTATCATGGCCAACCAGAGTGCATGCGAGAACTGTTATTGGCTGGAGCTGATCCAAATGCAGTTGATGACCAAGGTGAATCTATATTGCATTGTGCAGTAGCCAAGAAGTATACAGATTGTGCTCTAGTGATACTTGAAAATGGGGGCTGCAGATCAATGGCGATCATAAATCCAAAGAATATGACACCATTGCACCTGTGTGTGGAAACATGGAATGTGGCTGTTGTAAAAAAATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAACCCCATTGGCACTGCATTGTGCATGGCAGCTGCATCTAAGAAAGATCATGCAATTGAGGGGAGGGAACTGGTTCGAATATTGCTTGCTGCAGGTGCTGACCCATCTGCTCAAGATTCACAGTATGGGTGTACAGCTTTGCATACGGCTGTCAAATCTAATGATGTTGAGCTGGTTAAAGTTATCCTTGCTGCTGGTGTTGATGTGAACATTCGTAATGAGCAAAATAGTACGCCTCTTCACTTGGCTTTAACTAGTGGAGCAAAGTCATGTGTTAAATTGCTTCTATCTGCTGGGGCGGATTATAATTTGCTGGATGATGACGGTGACAATGCTTTGCACAAAGCAGCAAAGGCAGCAAAATCAGCACGTGAAAACCTTGACTGGCTCATTGTTATGCTAAGAAATCCTGATGCTGATGTTCATGTCAGAAACCACAGTGGAAGGACGCTACGTGACATATTGCAGGCCCTTCCCCGGGAATGGATATCTGAGGATCTGATGGAAGCACTTTTGTATAGAGGAGTTCATCTAACTCCTACAATGTTTGAAGTGGGAGATTGGGTGAAGTTCAAAAGAACTGTCACAACTCCAACTTATGGATGGCAATGTGCTAGCTCAAGGAGCGTTGGCTTTGTGCAAAATGTCCCAAGCAGAGACAATCTCATTGTTTCTTTTTGTTCTGGAGACGCCCATGTTTTAGCAAATGAAGTTGTGAAAGTTATTCCATTAGACAGGGGTCAACATGTACAGCTTAAATCAGAAGTTACAGAGCCCAGGTTTGGTTGGCGTGAACAGTCACGTGACAGAATAGGCACAGTATTATGCATTGACGATGATGGAATCCTACGTGTTGGGTTTCCAGGAGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGCAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGCATTCGTCCAACTCTTACTTCTACTAAGCATGGCTTAGGATCTGTGACACCAGGAAGCATTGGTATTGTATCTTCTATCAGGCCAGACAGTAGCCTGCTGATAGAACTCAGCTATCTTGCAACTCCATGGCATTGTGAGCCAGAAGAGGTTGAGCATGTTGCTCCCTTCAGGGTAGGAGATCGTGTATGTGTGAAGCGATCTGTTGCAGAGCCCAGGTGTGCTTGGGGAGGTGAGAGTCATCATAGTGTTGGAAGAATCAGTGAGATTGAGAATGATGGTCTCTTAATAATTGATATACCAAACCGACCAATACCCTGGCAAGCTGATCCATCTGATATGGAGAAGCTGGAAGATTTTAAGGTTGGAGATTGGGTCAAAATAAAATCTTCAGTTCCTTCCCCGAGATATGGATGGGATGATGTTACTAGGAGTAATATTGGGGTAATCCATAGCTTGGAGGAAGACGGTGATATGGGTATTGCTTTCTGTTTCAGAAGTAAACCTTTTCGTTGCTCTGTCACTGATGTGGAGAAAGTGCCACCTTTAGAGGCAGGGCAAGAAATTCATGTGATGCCATCTGTTACCCAGCCTCGACTTGGATGGTCAAATGAATCACCAGCTACCGTTGGAAAAATAGTGACAATTGACATGGATGGTGCTCTCAATGTGAGAGTCACAGGCAGGCAGAGCCTGTGGAAAGTTTCTCCTGGAGATGTAGAACAACTTTCAGGATTTGAAGTTGGTGATTGGGTACGTTCAAAACCAAGCATAGGAACCAGACCAAGTTATGATTGGAATGGTGCTGTGAAGGATGGTATAGCTGTTGTACACAGTGTACAGGATTCTGGATACTTGGAATTGGCTTGCTGTTTTCGTAAACAGAGGTACTTGGCTCATTATACAGATATTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGAGGTGCTCAGGCTAAATCTCAAGGCGTTTTAACCAGCATTCATGCTGATGGAGAAGTAAGAGTATTATTCTCTGGTTTGCCGGGTTTATGGAGAGGAGATCCTGCTGACCTTGAGATTGAGCAGATGTTTGAAGTGGGGAAGTGGGTAAGGTTGAAAGATAATGCAAACAATTGGAAATCGATTGTACCAGGCAGCATTGGTATAGTACAAGGAATAGGATTTAATGGTGATGAATGGGATGGAAGCACTTGTGTTGGCTTTTGTGGGGAGCAAGAAAGTTGGGTCGGACCAACTTCACATCTTGAAAGAGTTGACACACTGTCTGCTGGGCAGAAGGTTAGAGTTAAGCAGACCATAAAGAATCCAACATTCGGTTGGGCAGGGCACACCCATGCTGATGTTGGAACCATATCAGCAATTGATGCTGATGGAAAGCTTCGAATATACACTCCACCAGGATCAAAACCATGGATGTTGGACCCATCAGAAGTAGTATTAGTGGAGGAGGAGGAGATACAAATCGGAGATTGGGTGAAGGTCAGAGCATCAGTTTCAACCCCAACCCACCAATGGGGAGAAGTGGGTCACTCAAGCATCGGGGTGGTACATCGGATGGAAGGCGAGGATCTTTGGGTGTCATTCTGTTTCATGGAGAGGCTATGGCTTTGTAAGGCATGGGAAATGGAAAGGGTTAGGCCATTCATAATTGGGGACAAGGTAAGGATCAGAGAAGGACTTGTGAGTCCAAGGTGGGGATGGGGAATGGAGACACATGCTAGCAAGGGAGAGGTGGTAGGGGTAGACGCTAACGGAAAACTAAGGATAAAATTCAGGTGGAGGGAAGGGAAGCCTTGGGTGGGAGACCCTGCTGATATTGTTCTTGATGACAAGTGA 4854 0.4615 MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASLDTTLTCPKCRHVSNVGNSVQSLRKNYAVLALIHSASNATRSTFDGDFTDDEEDGDNDDDSTIFSRRGSQTSSSGRCGPVIEVGVHQELNFLRRIGEGRRAGVETWTAVLSGGGRSGQCRHYVAVKKVGITEEMNLNWVREQLENLRRTSMWCRNVCTFHGVMEVDKSLCLVMDRGYGSVQSEMQRNEGRLTLEQVLRYGADIARGVAELHAAGIVCMNLKPSNLLLDANGHAVVSDYGLAGILKKPSCWKAQPECDPSRIHSCMECMMLSPHHSAPEVWEPVKRSNLFRADSIGVSKESDAWSFGCTLVEMCTGFVPWAGLSAEQIYQAIVKGRKLPPQYACIVGGGIPRELWKMIGECLQFKPSKRPSFSAMLATFLHHLQEIPYSPAASPDKDSVECSVSTVLEASAQALELKIPQDYANHLHRLVSEGNVRGVRHLLVKAVSVNGSNYISSLLEAQNADGQTALHLACRRGSAELVEAILACKEADADVLDKDGVPSLAFALAAGSPECVRSLIKRNANVRSGLGDGFGPSIAHICAYHGQPECMRELLLAGADPNAVDDQGESILHCAVAKKYTDCALVILENGGCRSMAIINPKNMTPLHLCVETWNVAVVKKWVEVATSDEIAEAIDIPNPIGTALCMAAASKKDHAIEGRELVRILLAAGADPSAQDSQYGCTALHTAVKSNDVELVKVILAAGVDVNIRNEQNSTPLHLALTSGAKSCVKLLLSAGADYNLLDDDGDNALHKAAKAAKSARENLDWLIVMLRNPDADVHVRNHSGRTLRDILQALPREWISEDLMEALLYRGVHLTPTMFEVGDWVKFKRTVTTPTYGWQCASSRSVGFVQNVPSRDNLIVSFCSGDAHVLANEVVKVIPLDRGQHVQLKSEVTEPRFGWREQSRDRIGTVLCIDDDGILRVGFPGASRGWKADPAEMQRVEEFKVGDWVRIRPTLTSTKHGLGSVTPGSIGIVSSIRPDSSLLIELSYLATPWHCEPEEVEHVAPFRVGDRVCVKRSVAEPRCAWGGESHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKLEDFKVGDWVKIKSSVPSPRYGWDDVTRSNIGVIHSLEEDGDMGIAFCFRSKPFRCSVTDVEKVPPLEAGQEIHVMPSVTQPRLGWSNESPATVGKIVTIDMDGALNVRVTGRQSLWKVSPGDVEQLSGFEVGDWVRSKPSIGTRPSYDWNGAVKDGIAVVHSVQDSGYLELACCFRKQRYLAHYTDIEKVPCFKVGQYVRFRTGLVEPRWGWRGAQAKSQGVLTSIHADGEVRVLFSGLPGLWRGDPADLEIEQMFEVGKWVRLKDNANNWKSIVPGSIGIVQGIGFNGDEWDGSTCVGFCGEQESWVGPTSHLERVDTLSAGQKVRVKQTIKNPTFGWAGHTHADVGTISAIDADGKLRIYTPPGSKPWMLDPSEVVLVEEEEIQIGDWVKVRASVSTPTHQWGEVGHSSIGVVHRMEGEDLWVSFCFMERLWLCKAWEMERVRPFIIGDKVRIREGLVSPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGKPWVGDPADIVLDDK 1617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02345 1617 SMART ANK_2a 606 637 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 504 534 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 752 781 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 461 490 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 679 714 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 641 672 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 785 820 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 538 567 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 573 602 IPR002110 GO:0005515
Accr1g02345 1617 SMART ANK_2a 719 748 IPR002110 GO:0005515
Accr1g02345 1617 Gene3D - 635 758 IPR036770 -
Accr1g02345 1617 ProSiteProfiles Ankyrin repeat region circular profile. 752 784 - -
Accr1g02345 1617 ProSiteProfiles Ankyrin repeat profile. 504 537 IPR002110 GO:0005515
Accr1g02345 1617 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1616 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Accr1g02345 1617 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Accr1g02345 1617 Gene3D - 759 855 IPR036770 -
Accr1g02345 1617 Pfam Protein kinase domain 161 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02345 1617 Gene3D - 440 634 IPR036770 -
Accr1g02345 1617 PRINTS Ankyrin repeat signature 505 520 IPR002110 GO:0005515
Accr1g02345 1617 PRINTS Ankyrin repeat signature 768 782 IPR002110 GO:0005515
Accr1g02345 1617 SMART ring_2 6 51 IPR001841 -
Accr1g02345 1617 CDD RING-HC_KEG-like 3 59 - -
Accr1g02345 1617 ProSiteProfiles Ankyrin repeat region circular profile. 504 525 - -
Accr1g02345 1617 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 85 IPR013083 -
Accr1g02345 1617 ProSiteProfiles Ankyrin repeat region circular profile. 719 751 - -
Accr1g02345 1617 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Accr1g02345 1617 Pfam Mind bomb SH3 repeat domain 984 1104 IPR040847 -
Accr1g02345 1617 Pfam Mind bomb SH3 repeat domain 860 978 IPR040847 -
Accr1g02345 1617 Pfam Mind bomb SH3 repeat domain 1493 1611 IPR040847 -
Accr1g02345 1617 Pfam Mind bomb SH3 repeat domain 1236 1357 IPR040847 -
Accr1g02345 1617 Pfam Mind bomb SH3 repeat domain 1363 1484 IPR040847 -
Accr1g02345 1617 Pfam Mind bomb SH3 repeat domain 1110 1230 IPR040847 -
Accr1g02345 1617 Pfam RING-type zinc-finger 6 49 IPR027370 -
Accr1g02345 1617 SUPERFAMILY Protein kinase-like (PK-like) 129 429 IPR011009 -
Accr1g02345 1617 ProSiteProfiles Ankyrin repeat profile. 573 605 IPR002110 GO:0005515
Accr1g02345 1617 ProSiteProfiles Ankyrin repeat profile. 719 751 IPR002110 GO:0005515
Accr1g02345 1617 MobiDBLite consensus disorder prediction 84 119 - -
Accr1g02345 1617 Pfam Ankyrin repeats (3 copies) 697 782 IPR002110 GO:0005515
Accr1g02345 1617 Pfam Ankyrin repeats (3 copies) 579 658 IPR002110 GO:0005515
Accr1g02345 1617 Pfam Ankyrin repeats (3 copies) 466 565 IPR002110 GO:0005515
Accr1g02345 1617 ProSiteProfiles Protein kinase domain profile. 130 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02345 1617 Gene3D Transferase(Phosphotransferase) domain 1 124 425 - -
Accr1g02345 1617 ProSiteProfiles Ankyrin repeat profile. 752 784 IPR002110 GO:0005515
Accr1g02345 1617 SUPERFAMILY RING/U-box 5 61 - -
Accr1g02345 1617 SUPERFAMILY Ankyrin repeat 499 827 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02345 Accr-Chr1 58703830 58713158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02345 138 422 MAP Kinase Kinase Kinase AT4G08470 28.028 1.62e-17 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Accr1g02345 Pkinase 1.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02345 K16279 - gmx:100777576 2683.67