Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02340 ATGGCGTCTGGCGGGGGAAACGCAGGGGTAGAGTGGCACGTGCGGCCTCCTAACCCTAAGAATCCCGTCGTGTTCTTCGATATCACCATCGGTAACATCCCCGCTGGTAGAATCAAGATGGAGCTCTTCGCTGATATTGCCCCCAAAACTGCTGAGAATTTCAGGCAGTTCTGCACTGGCGAGTACAGGAAAGCTGGTCTTCCTGTTGGTTACAAAGGCTGTCAATTTCATAGGGTGATTAAGGATTTTATGATGCAGGCTGGTGACTTTGTGAAGGGTGATGGGAGTGGTTGTGTTTCCATCTATGGACACAAATTCGATGATGAAAATTTTATTGCCAAACATACTGGCCCTGGTCTTCTATCAATGGCAAACAGTGGACAGAATACCAATGGTTGCCAGTTTTTTATAACCTGTGCGAAATGTGACTGGCTTGACAACAAGCATGTCGTTTTTGGGAGGGTGCTTGGAGACGGCCTTTTGGTTGTCAGGAAGATTGAGAATGTGGCCACTGGACCCAATAACCGGCCCAAATTAGCTTGTGTCATCGCTGAGTGTGGAGAAATATGTGGACTGACAATTGTAGATGAGAATGCATACATAGACTCTAGATGA 615 0.4699 MASGGGNAGVEWHVRPPNPKNPVVFFDITIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPVGYKGCQFHRVIKDFMMQAGDFVKGDGSGCVSIYGHKFDDENFIAKHTGPGLLSMANSGQNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEICGLTIVDENAYIDSR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02340 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Accr1g02340 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Accr1g02340 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 146 IPR002130 GO:0000413|GO:0003755
Accr1g02340 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 IPR002130 GO:0000413|GO:0003755
Accr1g02340 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 IPR002130 GO:0000413|GO:0003755
Accr1g02340 204 Gene3D - 11 192 IPR029000 -
Accr1g02340 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 189 - -
Accr1g02340 204 CDD cyclophilin_ABH_like 22 187 - -
Accr1g02340 204 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 25 188 IPR002130 GO:0000413|GO:0003755
Accr1g02340 204 FunFam Peptidyl-prolyl cis-trans isomerase 11 189 - -
Accr1g02340 204 PIRSF Peptidylpro_ismrse 12 192 IPR024936 GO:0003755
Accr1g02340 204 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 IPR020892 GO:0003755|GO:0006457
Accr1g02340 204 SUPERFAMILY Cyclophilin-like 12 189 IPR029000 -
Accr1g02340 204 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 187 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02340 Accr-Chr1 58668044 58671302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02340 36 187 U-box Gene Family AT5G67530 42.484 2.18e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02340 K09567 - zju:107428673 389.423