Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02287 ATGGTGAATCAAACAGGAAATAGATCATCATCAAGTGAGCATCTCATGGAAACCGGACTTTCAAGTCCCCAAAATCCCAAAGCCCTGACTTCCAGTCATTCTATAAAAGACCAAGAGGAAGAAAATTTTCCAAAGGCTAAACACCAAAGATCAGTACTTTACATTTCTGAGAGTAAAGAAATAGGCCAGCCAGAAGCACCTCAATTTGAGATGAAAGAAGAGCTCACAAACCCACTATGTTCAGTGTGCAAGAACAAAAGACCACAAGCTGGATGGATAAGAGACTTCAGTTACTCTGAGCTTTACACAGCCACAAAGGGATTTTCCCAGAAGAATTTTTTATCAGAAGGTGGGTTTGGATTAGTATACAAAGGGCAGTTAGATGGAATGGAAATTGCTGTTAAGCAACACAAATGTGCTAGCCCGCAAGGGGAGAAGGAGTTCAAGTCAGAAGTCAATCTATTAAGCAAAGCAAGACATGAGAATGTAATCATGCTGTTGGGGTCATGCTCTGAAGGAGACAATAGGCTTCTTGTTTATGAATTCGTATGCAATGGTTCGCTGGATCAACACCTATCTGAACATTCTCGAACTCCACTTAGATGGGAAGATAGGATTAAAGTAGCTATTGGATCTGCTAAAGGCTTATTATACTTGCATGAGAATAACACCATACACAGAGATATTAGAACAAACAATATCCTCTTAACACATGATCATCAACCACTGCTGGGAGACTTTGGCTTGGCAAGAAGTCAACATGAAAATTCAATCCATTCAACAGAGGTTGTTGGGAGTTTTGGATATTTGGCTCCAGAATATGCAGAATATGGCAGAGTGTCGACTAAAATAGATGTTTATTCTTTTGGGGTAGTCCTATTGCAGCTAATAACTGGAATGAGGATTACAGACCAAAGACTTGAAGGCAAAAGTCTTGTCGGATGGGCAAGACCACTATTAAGAGAGAGGAATTATCCAAAACTAATTGACGAAAGGATCATGGATTCTCATGATTACCATCAACTATTTTGGATGGTTCGAATTGCAGAGAAATGTCTAAGCAGGGACCCTCACAAGAGACTAAACATGGGTGAGGTGGTTGTTGCTTTAACTCACATAGCGGAGGGCGAGATATGTGGGAACATAAACACAGATTTCTTCCCTGTGAGATCATATTCATTTTACAGTACATCAGACGAAAGCGAAGAATCATCAGAAGATGAAATAATGAATGATGCAGAAGATGAGTCAGAAAGTGGCGGTTCAGATTCCAGTAGCAACTTGAGGCAGATGTATTTAGGGCTCCCTAACCCTCCATCGCCTCCTCTAATAACGGATGCCACTTCATTTAGCAGGTCGGTTACAGTTAAAGAGCATGACCAGCCAACTATGAACACCCAAGTGGATGGTGTAATTCCAATGGATATAATCGCAGAAATGGAGGCGTAG 1449 0.4092 MVNQTGNRSSSSEHLMETGLSSPQNPKALTSSHSIKDQEEENFPKAKHQRSVLYISESKEIGQPEAPQFEMKEELTNPLCSVCKNKRPQAGWIRDFSYSELYTATKGFSQKNFLSEGGFGLVYKGQLDGMEIAVKQHKCASPQGEKEFKSEVNLLSKARHENVIMLLGSCSEGDNRLLVYEFVCNGSLDQHLSEHSRTPLRWEDRIKVAIGSAKGLLYLHENNTIHRDIRTNNILLTHDHQPLLGDFGLARSQHENSIHSTEVVGSFGYLAPEYAEYGRVSTKIDVYSFGVVLLQLITGMRITDQRLEGKSLVGWARPLLRERNYPKLIDERIMDSHDYHQLFWMVRIAEKCLSRDPHKRLNMGEVVVALTHIAEGEICGNINTDFFPVRSYSFYSTSDESEESSEDEIMNDAEDESESGGSDSSSNLRQMYLGLPNPPSPPLITDATSFSRSVTVKEHDQPTMNTQVDGVIPMDIIAEMEA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02287 482 MobiDBLite consensus disorder prediction 33 47 - -
Accr1g02287 482 PANTHER OS01G0253100 PROTEIN 41 375 - -
Accr1g02287 482 MobiDBLite consensus disorder prediction 398 448 - -
Accr1g02287 482 Pfam Protein tyrosine and serine/threonine kinase 111 368 IPR001245 GO:0004672|GO:0006468
Accr1g02287 482 SUPERFAMILY Protein kinase-like (PK-like) 91 385 IPR011009 -
Accr1g02287 482 MobiDBLite consensus disorder prediction 1 49 - -
Accr1g02287 482 SMART tyrkin_6 108 370 IPR020635 GO:0004713|GO:0006468
Accr1g02287 482 MobiDBLite consensus disorder prediction 400 419 - -
Accr1g02287 482 Gene3D Phosphorylase Kinase; domain 1 80 182 - -
Accr1g02287 482 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 183 385 - -
Accr1g02287 482 ProSiteProfiles Protein kinase domain profile. 108 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02287 482 MobiDBLite consensus disorder prediction 1 32 - -
Accr1g02287 482 FunFam Proline-rich receptor-like protein kinase PERK8 70 182 - -
Accr1g02287 482 Gene3D Transferase(Phosphotransferase) domain 1 183 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02287 Accr-Chr1 57708586 57712026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02287 89 376 Trihelix Transcription Factor Family AT5G38560 46.512 2.36e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Accr1g02287 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02287 - - pcin:129316641 707.983