Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02286 ATGAAGAACTTTCTAGCAGAAGGAGGATGTGGCAAAGTGTACAGAGGGAAGCTTCAAGATGGGACGAAGATAGCTGTGAAGCAGCAACGCAACAGAAATGAAAGCTGCCACAAGGAATTCAAGAGAGAAGTTGAAGCACTGAGGAGAGTGTGGCATGAGAATGTTGTTGTCATGTTGGGATCTTGCTCTGAAGGAATTCATAGCCTCATTGTCTATGAATTTGTCTGCAATGGTTCTCTCAACCAGCATTTACATCAACACTGTAGGGCACCTCTGAGTTGGGATAACAGAATAAAAGTGGCAATCGGAGCAGCAAGAGGATTACTATATCTGCATGACAAGAACATCATTCACAGAGACATTACGCCTAACAACATCCTTCTTACTCATGACTTTGAAATCTTGCTGGGAGATTTTGGGCTGGCAATAACAAGTGAAGAGGAAGAGACATCATCAGAAGAATGTGTAGGAGATGAGGATTATATGGCGCCAGAATATGCTGAACATGGAAAATTATCAACAAAAACAGATGTTTACTCTTTTGGGGTGGTTCTCTTACAGCTTATTACTGGCATCAGAACTACTGATAGAAGAAGACTTGGAGAAAGACGAAGCCTTGTCGATTGGGTCAGTAGTGCTCTTCCTTTTTTTAAGGAAAATTAA 663 0.4148 MKNFLAEGGCGKVYRGKLQDGTKIAVKQQRNRNESCHKEFKREVEALRRVWHENVVVMLGSCSEGIHSLIVYEFVCNGSLNQHLHQHCRAPLSWDNRIKVAIGAARGLLYLHDKNIIHRDITPNNILLTHDFEILLGDFGLAITSEEEETSSEECVGDEDYMAPEYAEHGKLSTKTDVYSFGVVLLQLITGIRTTDRRRLGERRSLVDWVSSALPFFKEN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02286 220 SUPERFAMILY Protein kinase-like (PK-like) 3 197 IPR011009 -
Accr1g02286 220 PANTHER OS01G0253100 PROTEIN 2 212 - -
Accr1g02286 220 Gene3D Transferase(Phosphotransferase) domain 1 76 218 - -
Accr1g02286 220 Pfam Protein tyrosine and serine/threonine kinase 3 191 IPR001245 GO:0004672|GO:0006468
Accr1g02286 220 Gene3D Phosphorylase Kinase; domain 1 5 75 - -
Accr1g02286 220 ProSitePatterns Tyrosine protein kinases specific active-site signature. 116 128 IPR008266 GO:0004672|GO:0006468
Accr1g02286 220 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02286 Accr-Chr1 57703249 57704540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02286 2 214 Trihelix Transcription Factor Family AT5G38560 47.032 1.65e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Accr1g02286 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02286 - - vum:124838318 265.003