Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02285 ATGAGTCAAATGGTGCATGACATTGACGATGGAGAGCTCCCCAGTGAGCAGAATGGGCCACAGTTGAATGATGAGAGCAATGGAGGAAGTGCCAGTGGAGTTATTCTGAAGAAAGGTCCATGGACATCTGCTGAAGATGGTATTTTGGTGGAGTATGTTAAGCAGCATGGGGAAGGGAACTGGAATGCTGTTCAGAAGCACTCAGGGCTGTCCCGATGCGGCAAAAGCTGCCGACTGAGGTGGGCAAATCACCTAAGGCCAAATTTAAAGAAAGGGGCTTTTACTGCAGAAGAAGAGTGGTTGATTGCTGAACTCCATGCCAAGATAGGAAACAAATGGGCACGCATGGCTGCACATCTGCCTGGTCGTACTGATAATGAGATAAAGAACTACTGGAATACTCGTATAAAGAGGCATCAGCGGGCTGGCTTGCCTCTATATCCTTCTGAAGTGCGTTTACAAGAATCGAAGGAGAGTCAACAAGGCCAAAGCACTGCTGGAAAAATTGGAGATAGAGGGCATACTGGTTTTCTGCTGGAAAATAGTTATCAGAAACATGATATTCTATTTGACAGTCTGAATGCAAATCAGGGAGGCCTTCCTTATGTGCTGGATATTCCTGATATTTCTGCTAATAACATTCTGCTGAAAGGTCTCGGTTCTTCCCAGCATTGTAATTTTTTGCCATCAACATTACCTTACCATAAGCACTTTCATGATTCAACAATGCCATTTCTTAGTTCATCTGAGGTGACCAGAAATGGGTTTTATCCTTTACACCATATTCAGGATTATACTTATGATAAGATTGCACAATCAATTGGATACTATTCTCCCCTTAATCCTGGTCCCTCCTCACAGAACTCACTGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTTTTGAGGCTGTGAAGCTGGAGCTCCCTTCACTCCAATATCCAGAAACTGATTTAAGCAGCTGGGGTACATCTCCTCCGCCTCCTTTGCTAGATTCAGTTGATGTTCTCACAGGTACTCCCCTGCCAACTAGTTTACTGGAGTCAGATTCTTCTTCACCCTACAACAGTGGCCTCCTGGATGCTTTACTTCATCAGTCCAAGAATCTGAGCAGTTCAAATAACCATTGTTCTGACAAGAGTTCAAATTCATCTACTGCTACCCCTGGTGATAGAGCCGACAGCTCCACTTTGTACGTGTATGAGCCAGAATGTGAAGATTATGCAGACTGCGTTTCTCCATTTGGTGCAACTTCGATGTTGAATGAATGTCTCGCTGTTAGTACCAACAGAAACTCATTTGATGAACTGCAACCCGCACAGACCTTAAATGAAAACACTCTGAAAGCGGAATCTGCTTACCAGGCTTTGACCCCCAACAGTGAGGATCAAGGCATGTCGATGTTGGATATGCCCCGACCAGATGTTTTGCTTGATTCAGATTGGTATGAGCTAGGCCCTGCATTTACCAAGAACCAGGTTGACGTGAACAATTCCAGAGCAACCCTCATTGGTGGTGATGATTTAGGCTCTGGCTTCAAGTACATGTCTGAGGAAATCTCATCTGGTCAAGTATGGAATTTGGATTCTTGCACTTGGAATAACATGCCTGCTGTTTGCCAAATGTCTGATCTTCCGTAA 1659 0.4436 MSQMVHDIDDGELPSEQNGPQLNDESNGGSASGVILKKGPWTSAEDGILVEYVKQHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEEWLIAELHAKIGNKWARMAAHLPGRTDNEIKNYWNTRIKRHQRAGLPLYPSEVRLQESKESQQGQSTAGKIGDRGHTGFLLENSYQKHDILFDSLNANQGGLPYVLDIPDISANNILLKGLGSSQHCNFLPSTLPYHKHFHDSTMPFLSSSEVTRNGFYPLHHIQDYTYDKIAQSIGYYSPLNPGPSSQNSLCYSHSLSNGNSSTSKPTFEAVKLELPSLQYPETDLSSWGTSPPPPLLDSVDVLTGTPLPTSLLESDSSSPYNSGLLDALLHQSKNLSSSNNHCSDKSSNSSTATPGDRADSSTLYVYEPECEDYADCVSPFGATSMLNECLAVSTNRNSFDELQPAQTLNENTLKAESAYQALTPNSEDQGMSMLDMPRPDVLLDSDWYELGPAFTKNQVDVNNSRATLIGGDDLGSGFKYMSEEISSGQVWNLDSCTWNNMPAVCQMSDLP 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02285 552 SMART sant 90 138 IPR001005 -
Accr1g02285 552 SMART sant 37 87 IPR001005 -
Accr1g02285 552 Gene3D - 93 139 - -
Accr1g02285 552 CDD SANT 40 85 IPR001005 -
Accr1g02285 552 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Accr1g02285 552 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Accr1g02285 552 Gene3D - 37 90 - -
Accr1g02285 552 ProSiteProfiles Myb-like domain profile. 36 85 IPR001005 -
Accr1g02285 552 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 140 IPR017930 -
Accr1g02285 552 MobiDBLite consensus disorder prediction 377 399 - -
Accr1g02285 552 FunFam MYB-related transcription factor 37 90 - -
Accr1g02285 552 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Accr1g02285 552 MobiDBLite consensus disorder prediction 323 343 - -
Accr1g02285 552 MobiDBLite consensus disorder prediction 1 36 - -
Accr1g02285 552 FunFam Transcription factor GAMYB 93 139 - -
Accr1g02285 552 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 507 - -
Accr1g02285 552 CDD SANT 93 134 IPR001005 -
Accr1g02285 552 MobiDBLite consensus disorder prediction 16 30 - -
Accr1g02285 552 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 89 IPR017930 -
Accr1g02285 552 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
Accr1g02285 552 MobiDBLite consensus disorder prediction 377 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02285 Accr-Chr1 57694253 57697320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02285 1 552 MYB Transcription Factor Family AT5G06100 40.142 1.41e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g02285 Myb_DNA-binding 2.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02285 K09422 - qsa:O6P43_029762 657.136