Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02273 ATGACGTCCTGTCCGTCCAAAAACCTATGGATTCGACGGCAACAATGCCCTTGTGGAGATTGGAAATGTTATGTGACGTATGAGGGAGATGGTGAAGAGATTTCAGCTGGACCGGAATTGGTGAAGACAACAGATAAAGCATCATCAGAAGCTATGGTTTCACCCTATGTAGGAATGGTGTTTAAGAGTGATGATGATGCATTTGAATATTATGGGAATTTTGCCCGGAAGAATGGGTTCTCTATTAGAAAAGAAAGATCCAGACTTAGCCAGCAATTAGGCGTTTATAAACGTGACTTTGTTTGTTATCGTTCAGGGTTTGCCCCAATGAAGAAAAAGTCTAATGGAGAACACCATAGAGATAGAAAATCCGTACGCTGTGGATGTGATGCAAAAATGTATCTGTCAAAGGAGATTGTGGATGGAGTTTCTCACTGGTTTGTTGTGCAGTTTAGTAATGTACATAATCATGAACTTTTGGAAGATGACCAAGTGCGGCTTCTTCCAGCGTATCGCAAAATACAAGAGGCTGATCAAGAGCGTATACTCTTACTTTCTAAAGCAGGGTTTCCAATTCATCGAATAGTGAAGATGCTTGAGCTGGAAAAAGGGATTCAAGGTGAGCAGCTGCCATTCTTGGAGAGGGATGTGAGGAATTTTGTTCAAAACCGGAAGAAGGTCATTCAGGAAAATGAGGCATTGCTAAGTGAGAAAAGAGAAAATGATGTATTGGAACTTCTTGAGTCATGCAAAACGATGAAAGAGACAGATGATGATTTTGTATATGAATTTACAGTGGATGGGAATGAAATGGTTTTGAATATAGCCTGGTCTTATAGTGACTCTGTTCGTGCTTATTCTATGTTTGGTGATGTGGTTTATTTTGACACCACATATCGATCAATCACATACGGATTGGTCTTTGGAGCATGGTTTGGTATTGACAACTATGGTAGAACCATTTTCTTTGGGTGTGTTCTATTGCAGGATGAAACGCCTCGGTCCTTCTCTTGGGCACTACAGAGTTTTGTCCGACTTATGAGAGGAAGGTGTCCACAAACAATTTTAACCAATATTGACCCTAGCCTTAGAGATGCCATAAGAAGCGAATTGCCAGGCACTAAACATGTAATCTCTATATGGTGTATAATGCCCAAGGTACCTTGCTGGTTTTCTGCTCCTCTTGGGCCTCGCTATGAAGAATTTAAATCTGAGTTTGATGCATTATATCACATTGAGAATTCCGAAGAATTTGAACTTCGATGGAACCAAATGACATCTGCCTTCAGTCTTGGATCAGACAGGCATATTGATCTTCTCTACTCTTTGCGGGCATCTTGGGCATTGTCTTATGTTAGAGGTTTCTTTTTGGCTCAGACGGCAACAGCAGCTTACTCAAAGTCGTTAGACAGTTTTTTGAAAGGCATCTTTAGGACACAAACATGTCTACGGAGCTTTTTTGAGCAGGTTGGCATTTCTGCAAATGTTCTTCATCATGCTCGTCAAGAAACTCCATATATGCGCCTCAAAAGTTGCTTACCTATTGAAGAGCATGCCCGTAGTATATACACACCTTTTGCTTTTAATGCCTTGCAACAAGAATTATTACTAACAATGCAATATGCTGCGTCGGAAATGTCCAACGGATCATATATTGTACGCCACTTCAAAAGCTTGGATGGCGAGCGTCTTGTAATATGGCTAGCTGAAGATGAACAAATCCATTGCTCTTGCAAGGAATTTGAATCCTCAGGGATATTGTGCAGACATGCTCTCCGTGTATTCACGATAAAAAATTACTTTCAGCTCCCTGATAAGTATTATTTAAGTAGATGGTGGCAACACGAGTCCTCTTTACTTCTTGATAATGATCATAATAATAATAGTAATCAAAGTATTGAGGATGAATGGTTTCAAGAATACCAGTCCCTTGCTGAAACTTTGTTTGCTGAATCTTCGATTACAAAGGAGCGATCTGACTTTGCTCGCAGAGAACTGACAAAGGAAATTACTAGGATTCTTAATGAGGTTAGAAATTTGCCTGAAAATGATGGGGTCACAATGGACTTGACTATTTCACCAAACATTTAG 2091 0.4008 MTSCPSKNLWIRRQQCPCGDWKCYVTYEGDGEEISAGPELVKTTDKASSEAMVSPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRLSQQLGVYKRDFVCYRSGFAPMKKKSNGEHHRDRKSVRCGCDAKMYLSKEIVDGVSHWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGEQLPFLERDVRNFVQNRKKVIQENEALLSEKRENDVLELLESCKTMKETDDDFVYEFTVDGNEMVLNIAWSYSDSVRAYSMFGDVVYFDTTYRSITYGLVFGAWFGIDNYGRTIFFGCVLLQDETPRSFSWALQSFVRLMRGRCPQTILTNIDPSLRDAIRSELPGTKHVISIWCIMPKVPCWFSAPLGPRYEEFKSEFDALYHIENSEEFELRWNQMTSAFSLGSDRHIDLLYSLRASWALSYVRGFFLAQTATAAYSKSLDSFLKGIFRTQTCLRSFFEQVGISANVLHHARQETPYMRLKSCLPIEEHARSIYTPFAFNALQQELLLTMQYAASEMSNGSYIVRHFKSLDGERLVIWLAEDEQIHCSCKEFESSGILCRHALRVFTIKNYFQLPDKYYLSRWWQHESSLLLDNDHNNNSNQSIEDEWFQEYQSLAETLFAESSITKERSDFARRELTKEITRILNEVRNLPENDGVTMDLTISPNI 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02273 696 Pfam MULE transposase domain 292 384 IPR018289 -
Accr1g02273 696 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 45 658 IPR031052 GO:0006355
Accr1g02273 696 ProSiteProfiles Zinc finger SWIM-type profile. 564 599 IPR007527 GO:0008270
Accr1g02273 696 Pfam SWIM zinc finger 571 596 IPR007527 GO:0008270
Accr1g02273 696 Pfam FAR1 DNA-binding domain 69 160 IPR004330 -
Accr1g02273 696 SMART 26again6 574 601 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02273 Accr-Chr1 57431290 57433537 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr1g02273 MULE 2.3e-15 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02273 - - gmx:100817107 1166.37