Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02272 ATGATGACGTCCTGTCCGTCCAAAAACCTATGGATTCGACGGCAACAATGCCCTTGTGGAGATTGGAAATGTTATGTGACGTATGAGGGAGATGGTGAAGAGATTTCAGCTGGACCGGAATTGGTGAAGACAACAGATAAAGCATCATCAGAAGCTATGGTTTCACCCTATGTAGGAATGGTGTTTAAGAGTGATGATGATGCATTTGAATATTATGGGAATTTTGCCCGGAAGAATGGGTTCTCTATTAGAAAAGAAAGATCCAGACTTAGCCAGCAATTAGGCGTTTATAAACGTGACTTTGTTTGTTATCGTTCAGGGTTTGCCCCAATGAAGAAAAAGTCTAATGGAGAACACCATAGAGATAGAAAATCCGTACGCTGTGGATGTGATGCAAAAATGTATCTGTCAAAGGAGATTGTGGATGGAGTTTCTCACTGGTTTGTTGTGCAGTTTAGTAATGTACATAATCATGAACTTTTGGAAGATGACCAAGTGCGGCTTCTTCCAGCGTATCGCAAAATACAAGAGGCTGATCAAGAGCGTATACTCTTACTTTCTAAAGCAGGGTTTCCAATTCATCGAATAGTGAAGATGCTTGAGCTGGAAAAAGGGATTCAAGGTGAGCAGCTGCCATTCTTGGAGAGGGATGTGAGGAATTTTGTTCAAAACCGGAAGAAGGTCATTCAGGAAAATGAGGCATTGCTAAGTGAGAAAAGAGAAAATGATGTATTGGAACTTCTTGAGTCATGCAAAACGATGAAAGAGACAGATGATGATTTTGTATATGAATTTACAGTGGATGGGAATGAAATGGTTTTGAATATAGCCTGGTCTTATAGTGACTCTGTTCGTGCTTATTCTATGTTTGGTGATGTGGTTTATTTTGACACCACATATCGATCAATCACATACGGATTGGTCTTTGGAGCATGGTTTGGTATTGACAACTATGGTAGAACCATTTTCTTTGGGTGTGTTCTATTGCAGGATGAAACGCCTCGGTCCTTCTCTTGGGCACTACAGAGTTTTGTCCGACTTATGAGAGGAAGGTGTCCACAAACAATTTTAACCAATATTGACCCTAGCCTTAGAGATGCCATAAGAAGCGAATTGCCAGGCACTAAACATGTAATCTCTATATGGTGTATAATGCCCAAGGTACCTTGCTGGTTTTCTGCTCCTCTTGGGCCTCGCTATGAAGAATTTAAATCTGAGTTTGATGCATTATATCACATTGAGAATTCCGAAGAATTTGAACTTCGATGGAACCAAATGACATCTGCCTTCAGTCTTGGATCAGACAGGCATATTGATCTTCTCTACTCTTTGCGGGCATCTTGGGCATTGTCTTATGTTAGAGGTTTCTTTTTGGCTCAGACGGCAACAGCAGCTTACTCAAAGTCGTTAGACAGTTTTTTGAAAGGCATCTTTAGGACACAAACATGTCTACGGAGCTTTTTTGAGCAGGTTGGCATTTCTGCAAATGTTCTTCATCATGCTCGTCAAGAAACTCCATATATGCGCCTCAAAAGTTGCTTACCTATTGAAGAGCATGCCCGTAGTATATACACACCTTTTGCTTTTAATGCCTTGCAACAAGAATTATTACTAACAATGCAATATGCTGCGTCGGAAATGTCCAACGGATCATATATTGTACGCCACTTCAAAAGCTTGGATGGCGAGCGTCTTGTAATATGGCTAGCTGAAGATGAACAAATCCATTGCTCTTGCAAGGAATTTGAATCCTCAGGGATATTGTGCAGACATGCTCTCCGTGTATTCACGATAAAAAATTACTTTCAGCTCCCTGATAAGTATTATTTAAGTAGATGGTGGCAACACGAGTCCTCTTTACTTCTTGATAATGATCATAATAATAATAGTAATCAAAGTATTGAGGATGAATGGTTTCAAGAATACCAGTCCCTTGCTGAAACTTTGTTTGCTGAATCTTCGATTACAAAGGAGCGATCTGACTTTGCTCGCAGAGAACTGACAAAGGAAATTACTAGGATTCTTAATGAGGTTAGAAATTTGCCTGAAAATGATGGGGTCACAATGGACTTGACTATTTCACCAAACATTTAG 2094 0.4007 MMTSCPSKNLWIRRQQCPCGDWKCYVTYEGDGEEISAGPELVKTTDKASSEAMVSPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRLSQQLGVYKRDFVCYRSGFAPMKKKSNGEHHRDRKSVRCGCDAKMYLSKEIVDGVSHWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGEQLPFLERDVRNFVQNRKKVIQENEALLSEKRENDVLELLESCKTMKETDDDFVYEFTVDGNEMVLNIAWSYSDSVRAYSMFGDVVYFDTTYRSITYGLVFGAWFGIDNYGRTIFFGCVLLQDETPRSFSWALQSFVRLMRGRCPQTILTNIDPSLRDAIRSELPGTKHVISIWCIMPKVPCWFSAPLGPRYEEFKSEFDALYHIENSEEFELRWNQMTSAFSLGSDRHIDLLYSLRASWALSYVRGFFLAQTATAAYSKSLDSFLKGIFRTQTCLRSFFEQVGISANVLHHARQETPYMRLKSCLPIEEHARSIYTPFAFNALQQELLLTMQYAASEMSNGSYIVRHFKSLDGERLVIWLAEDEQIHCSCKEFESSGILCRHALRVFTIKNYFQLPDKYYLSRWWQHESSLLLDNDHNNNSNQSIEDEWFQEYQSLAETLFAESSITKERSDFARRELTKEITRILNEVRNLPENDGVTMDLTISPNI 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02272 697 ProSiteProfiles Zinc finger SWIM-type profile. 565 600 IPR007527 GO:0008270
Accr1g02272 697 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 659 IPR031052 GO:0006355
Accr1g02272 697 Pfam SWIM zinc finger 572 597 IPR007527 GO:0008270
Accr1g02272 697 SMART 26again6 575 602 IPR006564 GO:0008270
Accr1g02272 697 Pfam MULE transposase domain 293 385 IPR018289 -
Accr1g02272 697 Pfam FAR1 DNA-binding domain 70 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02272 Accr-Chr1 57431290 57433540 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr1g02272 MULE 2.3e-15 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02272 - - gmx:100817107 1166.37