Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02254 ATGTCTCCCTACGGCAAGCTCGATGAATCCGAGCAAGAAAACCTTGTAGATCGCCGGAAAACCCAGAGGCGAATCACCATCATGAGCTTGTCAGCTGTTGTCCTGGTCGGCATTGTTGTGGCAGCTGTCTTGGGAACAAGTCTTGCTCACAACAATGACAAGGACAGCAACAACAGTAACAGCAGCAATAATGTTAATGTTTCGGCTTCGGTGAAAGCTGTGTGTGATGTGACATTGTTTAAGGATGCTTGTTATGCCAGCCTCGGATGTGTGGTTCAGCCAGGACAGGTGATTAAGCCTGAGGATTTGTTCAGGCTGTCTCTTCAAGTTGCACTGGATGAAGTTTCTGGTGCTGCTGCTAAGTATTTTTCTGGTGAAAAGGGAGGTTTTGAGGATTTGATTGGTAATGATAATAGGACCATGGAAGCCTTCAGTAATTGCAAGGAGCTTTTGGATCTTGCTGTTGATCATCTTAATGCGTCCTTGTCTTCTGGGCAGAATTCTTCTTCTGTTCTTGAACTTTTTGAAGATATTCAAACATGGTTGAGTGCTTCAGAAACATACCAACAAACATGCATAGATGGCTTAGAGGAAGCAAAAGGATCATTAAACAACAGAGTTAGAAGCTACCTAAAGAACTCTACAGAATTTACCAGCAACAGTCTCGCCATTATCACTTGGATTCAGCAGGCTACAAGCACACTAAACTTGAGACGACGCTTATTATTAACTCTACCAAATCACAATGAAGCACCGGCTTGGCTTCATCGGAAAGACAGAAAGTTGCTTGCATCAGACAAGGACTTGAAGCAGAAAGCAGACATAGTTGTGGCAAAAGATGGCTCTGGAAAGTACAGAACAATCTCTGAAGCACTCAAGCATGTCCCTGAAAAGAGCAAGGAGAGAACTGTGATCTATGTGAAGAAAGGAGTTTACTATGAGAATGTAAGGGTAAAGAAGAATAAATGGAATGTCGTGATGATTGGTGATGGAATGAACACAACCATTGTGTCTGGTCGTCTCAACTTTGTCGATGGCACGCCCACTTTCTCTTCTGCAACATTTGCTGTTTTTGGGAACAACTTTATGGCGAAGGACATGGGATTTCGCAACACTGCCGGGCCGCAGAAGCACCAAGCAGTGGCACTGATGGCAAGTGCAGATCAGGCTGTGTTCTACAGATGCCTCATTGATGCATTTCAGGACACTCTCTATGCTCATTCGCTACGCCAGTTCTACAGAGAATGTGACATTTATGGTACCGTTGATTTCATCTTTGGCAACTCTGCAGTTATTATCCAAAACTCCAACATCTTCCCAAAGGTACCGATGCGGGGCCAGCAGAACACAATTACAGCACAAGGGAAGATAGACCCTAATATGAACACAGGGATTTCAATTCAGAATTGCAGCATCTCACCATTTGGGAACTTGAGTTCTGTGCAAACATATCTTGGGAGGCCATGGAAGAACTACTCAACCACTGTGTTCATACAATGTTCAGTGGGAGACTTAATTAATCCAAGTGGCTGGCTGCCATGGGTTGGAAACTCAGCACCAGACACCATTTTCTATGCTGAGTTTCAGAACTTTGGACCTGGTGCTTCAACAAACAAAAGGGTCAAATGGAAGGGTTTAAGAACAATTTCTGCTAAACAAGCAAATAGATTCACTGTGAAGGCCTTTCTCCAAGGAGACCGATGGATTCCAGTTACAAGCACCCCTTACAAGTCTTCTCTGTGA 1743 0.44 MSPYGKLDESEQENLVDRRKTQRRITIMSLSAVVLVGIVVAAVLGTSLAHNNDKDSNNSNSSNNVNVSASVKAVCDVTLFKDACYASLGCVVQPGQVIKPEDLFRLSLQVALDEVSGAAAKYFSGEKGGFEDLIGNDNRTMEAFSNCKELLDLAVDHLNASLSSGQNSSSVLELFEDIQTWLSASETYQQTCIDGLEEAKGSLNNRVRSYLKNSTEFTSNSLAIITWIQQATSTLNLRRRLLLTLPNHNEAPAWLHRKDRKLLASDKDLKQKADIVVAKDGSGKYRTISEALKHVPEKSKERTVIYVKKGVYYENVRVKKNKWNVVMIGDGMNTTIVSGRLNFVDGTPTFSSATFAVFGNNFMAKDMGFRNTAGPQKHQAVALMASADQAVFYRCLIDAFQDTLYAHSLRQFYRECDIYGTVDFIFGNSAVIIQNSNIFPKVPMRGQQNTITAQGKIDPNMNTGISIQNCSISPFGNLSSVQTYLGRPWKNYSTTVFIQCSVGDLINPSGWLPWVGNSAPDTIFYAEFQNFGPGASTNKRVKWKGLRTISAKQANRFTVKAFLQGDRWIPVTSTPYKSSL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02254 580 NCBIfam pectinesterase inhibitor domain 59 228 IPR006501 GO:0004857
Accr1g02254 580 FunFam Pectinesterase 268 580 - -
Accr1g02254 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 228 IPR035513 -
Accr1g02254 580 Pfam Pectinesterase 274 566 IPR000070 GO:0030599|GO:0042545
Accr1g02254 580 Gene3D - 269 580 IPR012334 -
Accr1g02254 580 Pfam Plant invertase/pectin methylesterase inhibitor 70 224 IPR006501 GO:0004857
Accr1g02254 580 CDD PMEI-like_3 73 228 - -
Accr1g02254 580 SUPERFAMILY Pectin lyase-like 272 576 IPR011050 -
Accr1g02254 580 FunFam Pectinesterase 67 229 - -
Accr1g02254 580 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Accr1g02254 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 230 IPR035513 -
Accr1g02254 580 PANTHER PECTINESTERASE 36 572 - -
Accr1g02254 580 Coils Coil 193 213 - -
Accr1g02254 580 SMART PMEI_2 66 224 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02254 Accr-Chr1 57209741 57212646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02254 2 580 Carbohydrate Esterase AT3G10710 55.842 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02254 - - gmx:100808802 768.844