Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02253 ATGTCGGCGTTTTCAAATCTCCCTCTTCTCTTCATCTTCTTTTTCTTCTTCAGTTCTTCTCCTCCATTATTACTCCTCCAAGCCCAACCTCCTCCTCTTCCTCCGTCCCCTTCGGCTCTCTGCAAGTTCACATTGTACCCAAAACTATGTCGTTCCATGCTCTCCGTCATCTCCTCCACCCCCTCCGACCCCTACAATGCAGGCAAGTTCTCCGTCAAACAGAGCCTCAAGCAAGCCAAGAAGCTCCTCAAGGTCTTCGACGACTTCCTTCGCAGCAACCGCCATTCTCAATCCTCCCCGGAGGTTCGCGCCCTGGACGACTGCCGTGACCTCAGCCTCCTCAACCTCGACTATCTGGAAACCGTCGCCGCCGACCTCCAAGCCGCCGCAACGCCCTCCGCCGAGCTGACAGACAAGGTTGAGAGCTACCTGAGTGCGGTGGCGACCAACCACTACACGTGCTACGACGGGCTTGTGGCGGTGAACAGTAATATAGGGAAGGTGGTGGGGGTGGCGTTGAGGAATGTGACGGAGATGTATAGTGTGTCGTTAGGATTGGTTAGTCAAGCTTTGAATCAGAAAGTGAAGAACAAGTTCAAGACTCGCAAACATGGACTTCCTTCTCAGTCTTACAAAGTCAGACAGCCTCTTCAGAAGCTCATTCAGGTTCTTCATGAGAAGTACAGTTGCAACAAGACATCATCATCATCAAACTGCAGAAGCAGGAGTGAGAGGGTTATTGAGAGAGAGGGTGACAGCAAAGGGATTCTATTAAACAAGTATGCAACTGTGAGCCATTATGGGAATGATAACTTCACCTCCATTGGAGAAGCCATTGCTGCTGCACCCACAAACCTGAGACCAGAAGATGGTTACTACCTTCTCTATGTCAGAGAAGGATACTATGAAGAATATGTGATTGTTCCTAAACACAAGAAGAACATCTTGCTCATTGGTGATGGTATCAACAAGACTATTATCACAGGCAATCACAGTGTCATTGATGGTTGGACCACCTTCAATTCTTCCACCTTTGCTGTTTCTGGAGAAAGGTTCATAGCAGTGGATATCACATTCAGGAACACAGCAGGTCCAGAGAAGCACCAGGCAGTAGCAGTGAGGAACAACGCTGATCTCTCAACCTTTTATCGATGCAGCTTTGAAGGATACCAAGACACACTCTATGCTCACTCCCTGAGGCAGTTCTACAGAGAATGTGAAATTTATGGCACAGTAGACTTCATATTTGGCAATGCAGCTGTTGTATTCCAAAACTGCAAGATCTATGCCAGGAAGCCACTTCCATTCCAGAAGAATGCCGTCACAGCACAAGGCAGAACCGACCCGTATCAGAACACCGGAATCTCAATCCAGAATTGCACCATTGAAGCAGCACAAGATTTGGCTTCAGATATGAATTCAACTAATAATTCTTCTTTCTTGACCTACTTGGGAAGGCCGTGGAAGTTATATTCTAGAACTGTGTTCATGGAGTCTTATATTGGGGATGTGATTGAGCCTTCTGGTTGGTTGGAGTGGAATGGGACTGTAGGGTTGGACACTTTGTTTTTTGGTGAGTTCCATAATTATGGACCTAGGGCTAGTACTAGCAATAGGGTTCAATGGCCTGGGTTTAGTCTTCTGAATGCTTCTCAGGCTTTCAACTTTACTGTCCTGAATTTTACACTGGGAGATACATGGCTTCCTGACACAGATATACCCTACTCTGCAGGATTACTAGGAAATTAG 1749 0.4711 MSAFSNLPLLFIFFFFFSSSPPLLLLQAQPPPLPPSPSALCKFTLYPKLCRSMLSVISSTPSDPYNAGKFSVKQSLKQAKKLLKVFDDFLRSNRHSQSSPEVRALDDCRDLSLLNLDYLETVAADLQAAATPSAELTDKVESYLSAVATNHYTCYDGLVAVNSNIGKVVGVALRNVTEMYSVSLGLVSQALNQKVKNKFKTRKHGLPSQSYKVRQPLQKLIQVLHEKYSCNKTSSSSNCRSRSERVIEREGDSKGILLNKYATVSHYGNDNFTSIGEAIAAAPTNLRPEDGYYLLYVREGYYEEYVIVPKHKKNILLIGDGINKTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTVDFIFGNAAVVFQNCKIYARKPLPFQKNAVTAQGRTDPYQNTGISIQNCTIEAAQDLASDMNSTNNSSFLTYLGRPWKLYSRTVFMESYIGDVIEPSGWLEWNGTVGLDTLFFGEFHNYGPRASTSNRVQWPGFSLLNASQAFNFTVLNFTLGDTWLPDTDIPYSAGLLGN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02253 582 Gene3D - 260 581 IPR012334 -
Accr1g02253 582 PANTHER PECTINESTERASE 20 569 - -
Accr1g02253 582 SUPERFAMILY Pectin lyase-like 259 578 IPR011050 -
Accr1g02253 582 ProSitePatterns Pectinesterase signature 2. 408 417 IPR033131 -
Accr1g02253 582 NCBIfam pectinesterase inhibitor domain 38 189 IPR006501 GO:0004857
Accr1g02253 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 190 IPR035513 -
Accr1g02253 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 189 IPR035513 -
Accr1g02253 582 Pfam Pectinesterase 262 564 IPR000070 GO:0030599|GO:0042545
Accr1g02253 582 CDD PMEI-like_3 41 188 - -
Accr1g02253 582 FunFam Pectinesterase 257 579 - -
Accr1g02253 582 SMART PMEI_2 32 186 IPR006501 GO:0004857
Accr1g02253 582 Pfam Plant invertase/pectin methylesterase inhibitor 38 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02253 Accr-Chr1 57203135 57209150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02253 41 580 Carbohydrate Esterase AT3G10720 58.899 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02253 K01051 - gmx:100816503 816.994