Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02250 ATGGACATAGATCTAAGGTTACCTTCTGGCGACCATGAGAAGGATGAAGAACAAAATTCCATTGCTGACATATTGGAAGATGAAGAAAAGTTTCATCCTGGAGATCTAGAGGGGCAGAATATGGTTGGTGCTAGTGTTGATGTACATGCTCTAGATAGTGGAGATTTGAATTCATCGACAGTGGATATGACAATATTTAAAGAAGATTCAAATCTTGAGCCCCTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAATATGCAAGGTCTATGGGATTCAGCACTGCAATACAAAATAGTCGCCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAATTTGCTTGTTCCAGGTATGGAACAAAAAGAGAGCATGATAAATCATTCAATCGACCCCGTGCCAGACAGAACAAGCAAGATGCTGAGAATTCAACTGGTCGAAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCTGATGGAAAATGGGTAATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCTCAAGCTGTCAGTGAGCAAACAAGAAAAATGTATGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAAAGTCCATTTGACAAAGGCCGGAATTTGGGCCTAGAGTTTGGGGATGCCAAGCTTCTACTTGATTTTATGGTGCAGATGCATAGTATGAACTCTAACTTCTTTTATGCAGTAGATATTGGTGAGGATCAACGTCTGAAAAATCTTTTATGGATTGACGCTAAAAGTAGGCATGACTATGTGAACTTCTGTGATGTAGTTTCTTTTGACACCTTCTATGTTAGAAACAAATATAAATTGCCTCTTGCGCTTTTTGTTGGAGTAAATCAGCATTATCAATTTATGCTGCTTGGGTGTGCCTTAATATCAGATGAAAGTGCTGCTACTTATTCTTGGCTAATGCGGACGTGGCTGAAAGCAGTTGGTGGCCAAACTCCAAAAGTGATCATCATTGACCATGACAAGACATTAAAGTCGGTTATTTTAGATGTTTTTCCTAATGCTCATCACTCCATGTGCTTATGGCATGTAATAGGGATGGTGTCTGAAAATCTGGCTCATGTAATTAAGCGACATGAGAATTTTATGGCAAAATTTGAAAAATGCATCTATAGGTCATGGACAAACGATGAGTTTGAGAAGAAGTGGTCGAAAATTGTTGATAGGTTTGAGCTCCGAGAGGATGAATGCATGCAGTCATTGTATGAAGATCGCAAGTTATGGGTGCCGACATTCATGAAGGATATTTTCTTAGGTGGTTTGTCCACTGTCCAGCGATCAGAAAGTGTGAATTCCTTCTTTGATAAATATGTTCATAAGAAGACTTCTGTGCAAGATTTTGTCAAGCAGTATGAAGCAATCCTGCAAGACAGGTATGAAGAGGAAGCAAAAGGTGATTCTGAGACATGGAATAAGGTGGCAACATTAAAAACTCCTTCACCATTGGAGAAGAGTGTTGCAGGGAGTTACACTCATGCATTGTTCAGGAAGATTCAAGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACAGGATGATGCAGGCATTAGTTACAAGGTTCATGATATGGAAAAGAATCAAGACTTCATTGTTGTGTGGAATGAAATTAAATCTGAAGTTTCATGCATTTGTCGGTTATTTGAATATAGAGGTTTTCTTTGTCGACATGCATTGATTGTTCTTCAATATTCTGGCCTTTCAGTAATACCACCCCAATATATCTTGAAACGGTGGACAAGAAATGCAAAAAGTGGACAAATAATGGGAGAAGAATCAGAACATATGCTGGCTAGGGTACAACGATACAATGATTTATGTCAGCGAGCAATGAAGTTGAGTGAAGAGGGATCTCTATCTCAAGACAGTTATAGTATTGCATTCCATGCGTTACGTGAAGCATACAAAAGTTGTGTGAGTGCTAACATTTCTAGCAAGAGTCCTGCCGAAGCTGTCATATCAGCTAGTCAGAGTCAGCTCTCTACTGAAGAAGACACCCTAAGTAGAACTATAGGCAAGTCAAACAAAAAGAAGAATCCGACAAAGAAGAAAAAGCTGAACTCCGAGCCTGAAGTCATGACTGTTGGGGCACAAGATAACATGCAGCAAATGGACAAATTCAATGCAAGGACAGTAACCCTTGATGGTTATTATGGTTCTCAACAGAGTGTTCAGGGAATGTTGAACTTGATGGGACCAACACGCGATAATTATTATGGGAATCAACAGACAATTCAGGGGCTGGGACAATTAAGTTCCATACCAACGAGTCACGATGGTTACTATGGTGCTCCTCAAACCATGCCTGGTCTGGCACAGCTTGATTTTTTCCGGGCATCGACAAATTTCACTTATGGCATTCGGGATGATCAAAACGTAAGACCGACACAGTTACACGAGGACCCATCAAGACATGCATGA 2532 0.3993 MDIDLRLPSGDHEKDEEQNSIADILEDEEKFHPGDLEGQNMVGASVDVHALDSGDLNSSTVDMTIFKEDSNLEPLSGMEFESHGEAYSFYQEYARSMGFSTAIQNSRRSKTSREFIDAKFACSRYGTKREHDKSFNRPRARQNKQDAENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKTVVGLKNEKSPFDKGRNLGLEFGDAKLLLDFMVQMHSMNSNFFYAVDIGEDQRLKNLLWIDAKSRHDYVNFCDVVSFDTFYVRNKYKLPLALFVGVNQHYQFMLLGCALISDESAATYSWLMRTWLKAVGGQTPKVIIIDHDKTLKSVILDVFPNAHHSMCLWHVIGMVSENLAHVIKRHENFMAKFEKCIYRSWTNDEFEKKWSKIVDRFELREDECMQSLYEDRKLWVPTFMKDIFLGGLSTVQRSESVNSFFDKYVHKKTSVQDFVKQYEAILQDRYEEEAKGDSETWNKVATLKTPSPLEKSVAGSYTHALFRKIQVEVIGAVACHPKAERQDDAGISYKVHDMEKNQDFIVVWNEIKSEVSCICRLFEYRGFLCRHALIVLQYSGLSVIPPQYILKRWTRNAKSGQIMGEESEHMLARVQRYNDLCQRAMKLSEEGSLSQDSYSIAFHALREAYKSCVSANISSKSPAEAVISASQSQLSTEEDTLSRTIGKSNKKKNPTKKKKLNSEPEVMTVGAQDNMQQMDKFNARTVTLDGYYGSQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPTSHDGYYGAPQTMPGLAQLDFFRASTNFTYGIRDDQNVRPTQLHEDPSRHA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02250 843 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 676 IPR031052 GO:0006355
Accr1g02250 843 SMART 26again6 578 605 IPR006564 GO:0008270
Accr1g02250 843 ProSiteProfiles Zinc finger SWIM-type profile. 556 603 IPR007527 GO:0008270
Accr1g02250 843 Pfam SWIM zinc finger 572 601 IPR007527 GO:0008270
Accr1g02250 843 MobiDBLite consensus disorder prediction 129 163 - -
Accr1g02250 843 Pfam MULE transposase domain 287 378 IPR018289 -
Accr1g02250 843 MobiDBLite consensus disorder prediction 692 727 - -
Accr1g02250 843 Pfam FAR1 DNA-binding domain 88 190 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02250 Accr-Chr1 57174687 57178166 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr1g02250 FAR1 3.2e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02250 - - gmx:100817034 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02250 1 57174687 57178166 Accr1g02250 1 57174687 57178166 CCT
Accr1g02250 1 57174687 57178166 Accr1g02250 1 57174687 57178166 ECH