Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02246 ATGGCTTCTTCCCTTGCTAACAAGGGAACTGATAAGTATGGATCACTTTTACCTCCTCCACCAACCATCCGTCCTGATGTAGGATTAGAGAAAGCTTACTTGCCTAGGAAGAAAACATCAGATAGACAACTCTCGCCTATGGCCAGGCGCGGTTTTGGATCCAAGGGACAAAAGATTCAACTTCTGACTAACCATTTTCGAGTTAGCTTGGCCAAGAAAGATGGCTTCTTCTATCACTACACCGTTGCTCTCTTTTATGAAGATAACCGCCCTGTGGAAGCTAAGGGTATTGGGAGAAGAGTCTTGGACAAAGTTTATGAGACCTATGCTTCTGAGCTGCAAAGCAAGAGCTTTGCATATGATGGAGAGAAGGCCTTATTCACTATCACTTCACTCCCACGAAACAAGCTTGAATTCATCATCGTTCTAGATGAAATTTCATCAAACAAGGCTGGAAGGAATGGAAGCCCTGACAACACAGAGGAAACTGATAAGAAGAGAATGAGGCGCCCATATCAATCCAAGACATACAAGGTGGAGATCAGTTTTGCAAGAAAAATCCCTATGCAAGAGATTGTAGACGCATTGAGCGGTCTGGAATCTGATCATCACCAAGAAGCAATAAGGGTTCTGGACATCATATTAAGGCAGCATGCAGCAAAGCAGGGCTGTCTGCTTGTGCGTCAATCATTCTTCCATGACACAGTGGAAAATTACAGAGACATTGGAGGTGGTGTTCAAGGTTGTCGGGGTTTTCATTCAAGTTTCCGAGCAACTCAAGGGGGTTTGTCTCTTAATGTTGATGTGTCAACAACATTGCTTCTTAAGCCTGGTCCAGTTTTGGACTTCCTCTGCATGAATCAAAATGTTAATCATCCCGGTTCGATTAATTGGACCAAGGCAAAAAGGATGTTGAAAAATCTGAGAGTCAAGGTTAACAATTTGGAGCACAAAATCACTGGATTGAGTGATAGGCCGTGCAAAGATCAAAAATTTTCCTTAAAGCAAGGAAGAGACGCAAATGGTGAAGTGAAGACAATTGAAATAACGGTTCTTGATTATTTTGAACGCCATAAAGGCATCACATTGCGACATTCAGCTAATTTGCCATGCATCGACTGTGGCAAGCCAAAGAAACCTTCTTATATTCCAATAGAGTTCTGTACATTGGTCTCATTGCAACGCTACACTAAGGCCCTTACCAGTTTGCAAAGAGCTTCGGTTGTGGATGTTTCAAGGCAAAAGCCCCAAGAACGAATGACATCTCTGTTAAACTCAATAAGAAACAGCAGATATAATGATGAGCCTCTACTTCGTTCTTCTGGAATTTCAATCGACTCTGCCTTCACAAAAGTTGAAGGCCGTGTCCTGCCAGCTCCAAGGCTTAAGGTTGGCAATGAGGAGTTTTTTCCCAGAAATGGGAGGTGGAATTTCAACAACAAGCAACTTTTCCAACCAATGGCGATTGATCGTTGGGCTATAGTTAACTTCTCAGCTCGTTGTAATATTAAGTATCTTATTGAAGGCCTGAAGAAATGTGCACAGACGAAGGGGATGTTCTTGAAGGATCCATTTAATGTGTTTAATGAGGATGTGCACATGAGTCGTAAGCCGCCTACTGTCAGGGTTGAGGAATTGTATGCAATTGTGATGAAGCAGTTGCCTGGGTTACCACAGTTTCTATTGTGCATTCTCCCAGAGAAGAAGAATTCTGATATTTATGGTCCTTGGAAAAGAATAAATCTTGCAGTTGATGGAAAAGGGAAAGGGGTTGTTACACAATGTATTGCCCCAACAAAAATGAATGATCAGTACTTTACCAATGTTCTGTTAAAGATTAATGCAAAGCTTGGTGGGATGAATTCCAATTTGGCAATAGAGCATTCACTTTCTATACCTATGGTTTCACATGTGCCCACCTTAATTCTTGGGATGGATGTCTCACATGGCTCTCCTGGTCGATCAGATGTGCCATCTATAGCAGCAGTTGTTAGCTCAAGGTGTTGGCCTCAGATTTCTCGTTATAGAGCATCAGTTCGTGCTCAGTTACCAAAACTTGAAATGATTGCTAATCTATTCAGTCCCCTTTCTGATACCAAGGATGATGGCATTTTTAGAGAGCTGCTTGATGACTTCATTGAAACTTCCGGAGGAAGGAGGCCTGAACATATTGTCATATTTAGGGACGGAGTTAGTGAATCTCAATTCAATCAAGTGTTAAACATTGAATTGAATCAAATTATTCAGGCATGCAAGCACTTCCAAGAAAGTTGGGATCCAAAGTTTACTGTAATTATTGCCCAAAAAAATCATCATACTAAGTTCTTCCAGGCCAATGCTCAAGAAAATGTTCCACCAGGCACTGTCATTGATAATAGAATCTGTCACCCTAAAAACAATGATTTTTACATGTGTGCTCAAGCTGGGATGATCGGAACAACTCGACCTACTCATTATCATGTACTACACGATGAGATTGGTTTCTCTGCTGATGGTTTGCAAGAACTTGTTCATTCTCTTTGTTATGTATATCAGAGGAGCACAACGGCTGTATCAGTAGTTGCCCCAGTATGTTATGCCCACTTAGCAGCAGCACAAGTGGCACAGTTTATCAAGTTTGATGAATTTTCAGAGTCTTGTTCTAGCCATGGTGGACTCACTTCAGTTGGTACACCTCAAGTGCAAGAGTTGCCACGTCTTCATGAACGAGTCCGCGACTCCATGTTCTTCTGTTAG 2736 0.4189 MASSLANKGTDKYGSLLPPPPTIRPDVGLEKAYLPRKKTSDRQLSPMARRGFGSKGQKIQLLTNHFRVSLAKKDGFFYHYTVALFYEDNRPVEAKGIGRRVLDKVYETYASELQSKSFAYDGEKALFTITSLPRNKLEFIIVLDEISSNKAGRNGSPDNTEETDKKRMRRPYQSKTYKVEISFARKIPMQEIVDALSGLESDHHQEAIRVLDIILRQHAAKQGCLLVRQSFFHDTVENYRDIGGGVQGCRGFHSSFRATQGGLSLNVDVSTTLLLKPGPVLDFLCMNQNVNHPGSINWTKAKRMLKNLRVKVNNLEHKITGLSDRPCKDQKFSLKQGRDANGEVKTIEITVLDYFERHKGITLRHSANLPCIDCGKPKKPSYIPIEFCTLVSLQRYTKALTSLQRASVVDVSRQKPQERMTSLLNSIRNSRYNDEPLLRSSGISIDSAFTKVEGRVLPAPRLKVGNEEFFPRNGRWNFNNKQLFQPMAIDRWAIVNFSARCNIKYLIEGLKKCAQTKGMFLKDPFNVFNEDVHMSRKPPTVRVEELYAIVMKQLPGLPQFLLCILPEKKNSDIYGPWKRINLAVDGKGKGVVTQCIAPTKMNDQYFTNVLLKINAKLGGMNSNLAIEHSLSIPMVSHVPTLILGMDVSHGSPGRSDVPSIAAVVSSRCWPQISRYRASVRAQLPKLEMIANLFSPLSDTKDDGIFRELLDDFIETSGGRRPEHIVIFRDGVSESQFNQVLNIELNQIIQACKHFQESWDPKFTVIIAQKNHHTKFFQANAQENVPPGTVIDNRICHPKNNDFYMCAQAGMIGTTRPTHYHVLHDEIGFSADGLQELVHSLCYVYQRSTTAVSVVAPVCYAHLAAAQVAQFIKFDEFSESCSSHGGLTSVGTPQVQELPRLHERVRDSMFFC 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02246 911 Gene3D - 456 625 - -
Accr1g02246 911 CDD PAZ_argonaute_like 277 391 - -
Accr1g02246 911 Pfam PAZ domain 281 408 IPR003100 GO:0005515
Accr1g02246 911 MobiDBLite consensus disorder prediction 1 27 - -
Accr1g02246 911 SUPERFAMILY Ribonuclease H-like 558 870 IPR012337 -
Accr1g02246 911 Gene3D - 631 911 IPR036397 GO:0003676
Accr1g02246 911 SMART DUF1785_2 225 277 IPR014811 -
Accr1g02246 911 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 45 874 - -
Accr1g02246 911 FunFam Protein argonaute 3 632 911 - -
Accr1g02246 911 Pfam N-terminal domain of argonaute 57 215 IPR032474 -
Accr1g02246 911 Coils Coil 298 325 - -
Accr1g02246 911 Gene3D paz domain 271 396 - -
Accr1g02246 911 Pfam Argonaute linker 2 domain 418 463 IPR032472 -
Accr1g02246 911 SUPERFAMILY PAZ domain 272 432 IPR036085 GO:0005515
Accr1g02246 911 SMART Piwi_a_2 560 872 IPR003165 GO:0003676
Accr1g02246 911 Pfam Argonaute linker 1 domain 227 273 IPR014811 -
Accr1g02246 911 ProSiteProfiles PAZ domain profile. 317 392 IPR003100 GO:0005515
Accr1g02246 911 ProSiteProfiles Piwi domain profile. 560 872 IPR003165 GO:0003676
Accr1g02246 911 Pfam Piwi domain 561 872 IPR003165 GO:0003676
Accr1g02246 911 CDD Piwi_ago-like 436 871 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02246 Accr-Chr1 57107820 57113739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02246 49 911 Eukaryotic Initiation Factors Gene Family AT5G43810 35.619 7.28e-167 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02246 K11593 - pvy:116126885 1250.73