Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02240 ATGGATGTTGAAGCAGTGGATGAAGGAGAAAGCAATGATAGACTTGAACGTGACAAGGGCCAGAGACAGAATGTAACTGTAAACCTGGCTGAAACAGAAGTAATTAATCATAGTGGTGATGCAGAGATGAGACCACAAGTGGGCATGCTGTTTGAAACAGAAGATGCTGCAAGATTATTTTATGATGCATATGCAAGGCGAAATGGTTTTAGCACCCACGTGGGTCAGTTCAGCCGTACAAACCCTGATGGTCCAATTATAACTTGGGACTATTCTTGCACTAGGGAGGTCTTGAAAAGGAAGAACATAGAAAGTTGCAATGCAATGCTTAGAATAGAGAGAAAAGATGCCAACAGCTGGATTGTCACAAAATTTGTTGAGGACCATAACCATTCCCTGGCCTCCCCTAGTAAGGTGCACCATCTTCGACCACGTAGGCATTTTGCTGGTGCTACAAGGAATGCTTCTGAGACATTCAATGCTACCAGTGATGCCTATATCTCAACAGATGGGAATCATGTATTTCATGAACCAACTCGTCTAGTCAGGAGTTCCTCTCCGGTAGATCATAATTATCGATCCAGAAATACTATTCCTTTAACATATGTAAGACCTACTCGAAATAGGACCCTCGGAAGAGATGCTCAAAATCTTCTGAATTATTTTAAGAAGACGCAAGCAGAAAATCCTGGCTTTTATTATGCTATACAACTTGATGATGAGAACCGCATGACCAATGTGTTTTGGGCTGATGCAAGGTCAAGAGCAGCCTATAACTACTTTGGTGATACTGTAGTTTTTGATACAATGTATAGACCAAATCAATACCAAGTCCCATTTGCTCCCTTTACAGGAATCAATCACCACGGTCAAATGTTTTTATTTGGTTGTGCATTACTTTTCGATGAATCCGAGTCTTCCTTTACTTGGCTATTCAAGACATGGCTATCTGCTATGAATGATCGACCTCCTGTTTCAATAACCACAGACCAAGATAGAGCTATTCAAGCTGCTGTTGCCAAGGCCTTTCCAGGAACTCGCCACTGTATTTGCAAGTGGCACATTTTGAGGGAAGGTCAAGAGAGATTAGCTCATGTTTACCTAGCTCATCCTTCTTTTTACGGAGAGCTATATAGCTGCATCAATTTCTCTGAGACTGTTGAGGACTTTAAATCAACATGGAATTCTCTACTAGATAAATATAAGCTTCAGAAAAATGAATGGCTCCAGGCAGTGTTTAATGCTCGCAAACAGTGGGCCCCTGTTTATTTCCGTGGCACATTCTTTGCCGCACTCATTTCAAACCATGGGGCCAGCTCCTTTTTTGATGGCTTTGTGAACCAGCAGACAAACTTACCTTTATTCTTTAAGCAGTATGAAAGGGCTCTTGAGCAGTCATTGGAAAAAGAAATAGAAGCTGATTATGATACAATTTGCACCACACCAGTCTTGAAGACTCCATCACCAATGGAACAACAGGCTGCAAATCTTTACACAAAAAAGATTTTTGCAAAGTTTCAAGAGGAACTGGTGGAAACTTTTGCGTATACTGCTGACAATATTGACAGTGATGGTATGGTCAGTAAATATAGGGTTGCAAAATATGAACATGATCACAAGGCATACCTGGTAACTTTAGATGCTTCTGAATTGAAAGCAAATTGCAGCTGTCAAATGTTTGAATACTCAGGCATTCTTTGCAGGCATATTTTGACTGTATTTACTGTCACAAATGTTCTTACACTTCCACCACGCTACATATTGAAGCGATGGACAAGGAATGCTAAATTTAATATGCAATCAGATGATCAAATTTTAGATTCACATGCCATTGAAACCCTCACCCTGCGTTTCAATAGTATATGTCATGAAGCCATTAAACTCGCTGAAGAAGGAGCAGCAGGAGTGGAAACTTATAATGCTGCCATGAATGCTTTAAGAGAGGGTGTGAAAAAGGTTGCTGTTGTGAAAAAAAATGTTGTGAAAGTCACTCCTCCAAGTGCTCAGGGTAATGGAAGTAGTCAGGAAGATCATAGCAAGAAGAGCCCTTTATCCACATGGCAAGATCCAGTGCCACATTGCTTTAATCTTAATGATGTTGGGCTTCCTGTTGCTGATCTTAATCAACCAAGTATGGCTCCTGTTTCTATTTGTCGCAATGGTGGTCCTCCTGATAACCCTGTTGTTCTTACGTATTTCAAGTCTATGAGTTGGGTCATTGAAGATAAGAATTCAATCTCAACCAGTAAAGCTGCAATGATCAACTTGAAGCTTCAAGATTATGGCAAGAACCCTCCGGCCGAGAATGAAATACAATTTCGGGTAACAAGGGTCACTTTGGAGCCTATGATGAGATCTATGGCTTATATCAGTCAGCAACTCTCCGCACCAGTCAATAAAGTTGCTGTCATCAATCTGAAGCTCCAGGACACAAAGACAACTACTGGGGAAACAGAAGTGAAATTCCAGGTTTCCAGGGATACAATGGGTTCCATGCTCAAGTCTATGGCCTTTGTGCGCGACCAGCTATGA 2532 0.4115 MDVEAVDEGESNDRLERDKGQRQNVTVNLAETEVINHSGDAEMRPQVGMLFETEDAARLFYDAYARRNGFSTHVGQFSRTNPDGPIITWDYSCTREVLKRKNIESCNAMLRIERKDANSWIVTKFVEDHNHSLASPSKVHHLRPRRHFAGATRNASETFNATSDAYISTDGNHVFHEPTRLVRSSSPVDHNYRSRNTIPLTYVRPTRNRTLGRDAQNLLNYFKKTQAENPGFYYAIQLDDENRMTNVFWADARSRAAYNYFGDTVVFDTMYRPNQYQVPFAPFTGINHHGQMFLFGCALLFDESESSFTWLFKTWLSAMNDRPPVSITTDQDRAIQAAVAKAFPGTRHCICKWHILREGQERLAHVYLAHPSFYGELYSCINFSETVEDFKSTWNSLLDKYKLQKNEWLQAVFNARKQWAPVYFRGTFFAALISNHGASSFFDGFVNQQTNLPLFFKQYERALEQSLEKEIEADYDTICTTPVLKTPSPMEQQAANLYTKKIFAKFQEELVETFAYTADNIDSDGMVSKYRVAKYEHDHKAYLVTLDASELKANCSCQMFEYSGILCRHILTVFTVTNVLTLPPRYILKRWTRNAKFNMQSDDQILDSHAIETLTLRFNSICHEAIKLAEEGAAGVETYNAAMNALREGVKKVAVVKKNVVKVTPPSAQGNGSSQEDHSKKSPLSTWQDPVPHCFNLNDVGLPVADLNQPSMAPVSICRNGGPPDNPVVLTYFKSMSWVIEDKNSISTSKAAMINLKLQDYGKNPPAENEIQFRVTRVTLEPMMRSMAYISQQLSAPVNKVAVINLKLQDTKTTTGETEVKFQVSRDTMGSMLKSMAFVRDQL 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02240 843 MobiDBLite consensus disorder prediction 1 22 - -
Accr1g02240 843 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 654 IPR031052 GO:0006355
Accr1g02240 843 Pfam MULE transposase domain 265 357 IPR018289 -
Accr1g02240 843 Pfam SWIM zinc finger 542 576 IPR007527 GO:0008270
Accr1g02240 843 SMART 26again6 553 580 IPR006564 GO:0008270
Accr1g02240 843 ProSiteProfiles Zinc finger SWIM-type profile. 542 578 IPR007527 GO:0008270
Accr1g02240 843 MobiDBLite consensus disorder prediction 664 685 - -
Accr1g02240 843 Pfam FAR1 DNA-binding domain 60 134 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02240 Accr-Chr1 57035942 57041635 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr1g02240 MULE 8.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02240 - - gmx:100789242 1321.99