Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02237 ATGGACTCGAATAAGGAAGCTGGAAACTCCTCACATTTCGACCCAGCTTTGAAATCATCATCTCGAAGAAGCATAACCTCGAGTCACTCTCGGGGATCCGACACGGTTTCGGTTCGGGAAGTGCCTTTAAGTCATTCAGGATCGAAGCCTGTTCGGTATGGGTCAAAAGGCGCTGATTCGGAAGGATTCAGCATGTCGCGGAAGGAAATCAACGACGAGGATGCGAGGTTGGTTTATATAAACGATCCTCAGAGGACAAACGAGAGGTTTGAATTCTCAGGAAATTCTATTCGTACTGGGAAATACTCCGTCATCACCTTCTTGCCCAGAAATTTGTTCGAACAATTTCACAGAGTCGCTTATATTTATTTCCTTGTAATAGCCGTTCTTAATCAGCTTCCTCAGCTCGCCGTTTTTGGTAGAGGAGTTTCCATTTTGCCTTTAGCATTTGTTCTGCTCGTGACAGCCGTGAAGGATTTGTTTGAGGATTGGAGGAGACATCGATCAGATAAAGTGGAGAACAGCAGATTAGCGTCTGTTTTAGTTGGTGAGCAATTTGAACAGATGAAATGGAAGGATATTAGAGTTGGTGAAATTGTTAAAATCCATGCAAATGAAACCATCCCTTGTGATATTGTGCTGCTATCAACCAGCGATCCAACTGGGGTTGCGTATGTGCAGACTATAAATTTGGATGGAGAGTCAAATTTGAAGACTCGATATGCAAAGCAAGAGACCCTTTCAAAGCTGCCTGAAACAGAAAGAATCAGTGGTTTGATTAAGTGTGAAAAACCCAATAGGAACATATATGGGTTTCAAGCTAACATGGAAGTTGATCAGAAGCGTTTGTCACTTGGATCCTCCAATATTGTTCTTCGAGGCTGTGAGCTCAAGAACACTAAATGGGCACTTGGTGTTGCTGTATATTGTGGCGGAGAGACCAAAGCTATGCTCAACAACTCAGGAGCTCCATCTAAGAGAAGCCGGCTTGAGACTCGGATGAACTCCGAGATAATCATGCTCTCTGTCTTTCTTGTAGCTTTGTGTACTGTCATATCTGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAACGATGAGTTAGATATGTTGCCTTATTATAGGAGGCTGAACTTTAATGACAGAGATAAAGAGGGAGAATTCACAAACTACGAGTATTATGGATGGGGATTGGAAATTGCTTTCACATTCCTTATGTCTGTTATAGTTTTCCAGGTCATGATCCCCATATCATTGTACATTTCCATGGAGCTTGTCCGCGTTGGCCAGGCCTACTTCATGATCGGAGACAACAGAATGTATGATGAGGCATCAAATTCCAGATTTCAGTGCAGGGCTTTAAACATCAATGAAGATTTAGGGCAAATCAAGTATGTTTTCTCAGATAAAACTGGCACACTTACTGAGAACAAGATGGAGTTTCAATGTGCTAGCATCGGGGGTGTTGATTACAGTAAGACAAATGAAATTCAGGAGAATGAGCTAGTTGAATACTCTGTTGAAGTGGATGGAGAAGTGTTGAGGCCCAAGATGAAGGTGAAAGTAAATCCAGAGCTCTTGCAGTTATCAAGAAGTAGACTTGAAAACGACAAAGGAAAACGAATTCATGACTTCTTCCTAGCATTGGCAGCCTGCAATACCATTGTTCCTCTTCATGTTGACACATCTGATCCTAAAGTCAAGTTGATAGATTATCAAGGGGAGTCACCAGATGAACAAGCACTGGCATATGCGGCTGCCACCTATGGTTATACTCTTATAGAACGGACCTCAGGCCATATAATGATTGATATTCAGGGAGAGAGACACAAGTTCAATGTCTTGGGCTTGCATGAATTTGATAGTGACCGGAAGAGAATGTCTGTCATATTGGGGTATCCCGACAATTCTGTGAAACTTTTGGTCAAGGGTGCTGATACATCCATGTTAAGTGTAATAAATAAGTCATCAAACATGGACAGAATACATGCAACTGAGAGCCATCTGCACTCATACTCTTCTCTGGGGTTGAGGACTCTTGTCATTGGAATGAGGGAACTGAATACTTCAGAATTTGAGCAATGGCACCAATCCTTTGAGGCAGCAAGCAGTGCTTTGCTGGGTCGGGCTGCTAAACTTCGTAAGGTTGCTAGCAATATTGAAAACAACCTCTGCATATTGGGTGCATCCGCTATTGAAGATAAATTGCAGAAAGGGGTGCCAGAATCCATTGAGTCTCTGAGAACTGCAGGTATTCAGGTATGGGTATTGACTGGGGACAAACAGGAAACTGCTATATCAATTGGCTACTCCTCAAAGCTCCTAACAGGTGACATGACTCAGATTATAATTAACAGCAAGAATAAAGAGTCCTGTAGAAGGAAATTACAAGATGCCCTTGTCATGTCCCAAAAACTCATGGCTGCTTCTGGTGTTGCCAATGTTACTGAAACTTCTTTCGCTCCTAAAATTCCAACAGCCTTGATCATTGATGGTACCAGCCTTGTGCATGTTCTTGATAATGAACTCGAAGAACAGCTCTTTGAACTAGCAAGCAAATGTTCGGTGGTTCTTTGTTGTCGAGTGGCTCCATTGCAAAAAGCTGGGATTGTTGCCCTCGTGAAAAAAAGGACGTCTGACTTGACACTAGCTATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAGGAAGGTCGGCAAGCTGTAATGGCATCTGATTTTGCCATGGGGCAGTTTAGGTTTTTAGTTCCCCTCTTGTTGGTGCATGGACACTGGAATTACCAACGTTTGGGTTATATGATACTGTACAATTTTTACAGAAATGCTGTCTTTGTTCTGGTCTTATTTTGGTATGTGCTCTTCACCGCCTTCTCTTTGACGACAGCTATAAATGAATGGAGCAGCATGCTGTTCTCAATCGTTTACACTGCATTGCCAACAATTGTCGTTGGTATTCTTGACAAAGACCTTAGTAAAAGGACTCTTTTAAACTGTCCTCAGCTTTATAGGGCCGGACAGAGACAAGAGGCATACAACAAAAAGTTATTTTGGATTACAGTGGTTGATACATTGTGGCAAAGCATTGTTATTTTCTATGGTGCTTTCTTTGCATATTGGGGAAGCACTATTGATGTAGCAAGCATTGGAGATCTTTGGACTCTTGCAGTGGTTATTGTAGTTAATATACACTTGGCCATGGATGTTATCAGGTGGAATTGGATTGCTCATGTTTCCATTTGGGGGTCTATAGCTGCAACTTTCATCTCCATCATGATCATCGATGCTATCCCTACACTTCCTGGTTACTGGGCCATATTTCATGCGTTAGGAACTGGATCCTTTTGGCTATGTCTGCTTGGAATCATCATTACAGCATTGCTCCCTCGTTTCATGGTGAAGTATATTTATCAATATTACTTCCCTGATGATATCCAGATCTCAAGAGAAGCTGAGAAGGTTGAAGCTTCTAGGGTGGTGGTTGGTGGAGATATAGAAATGCATCCCATTCCAGTTGGTCCACCAAGATCATGA 3561 0.424 MDSNKEAGNSSHFDPALKSSSRRSITSSHSRGSDTVSVREVPLSHSGSKPVRYGSKGADSEGFSMSRKEINDEDARLVYINDPQRTNERFEFSGNSIRTGKYSVITFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLLVTAVKDLFEDWRRHRSDKVENSRLASVLVGEQFEQMKWKDIRVGEIVKIHANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKLPETERISGLIKCEKPNRNIYGFQANMEVDQKRLSLGSSNIVLRGCELKNTKWALGVAVYCGGETKAMLNNSGAPSKRSRLETRMNSEIIMLSVFLVALCTVISVCAAVWLKRHNDELDMLPYYRRLNFNDRDKEGEFTNYEYYGWGLEIAFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIGDNRMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIGGVDYSKTNEIQENELVEYSVEVDGEVLRPKMKVKVNPELLQLSRSRLENDKGKRIHDFFLALAACNTIVPLHVDTSDPKVKLIDYQGESPDEQALAYAAATYGYTLIERTSGHIMIDIQGERHKFNVLGLHEFDSDRKRMSVILGYPDNSVKLLVKGADTSMLSVINKSSNMDRIHATESHLHSYSSLGLRTLVIGMRELNTSEFEQWHQSFEAASSALLGRAAKLRKVASNIENNLCILGASAIEDKLQKGVPESIESLRTAGIQVWVLTGDKQETAISIGYSSKLLTGDMTQIIINSKNKESCRRKLQDALVMSQKLMAASGVANVTETSFAPKIPTALIIDGTSLVHVLDNELEEQLFELASKCSVVLCCRVAPLQKAGIVALVKKRTSDLTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVFVLVLFWYVLFTAFSLTTAINEWSSMLFSIVYTALPTIVVGILDKDLSKRTLLNCPQLYRAGQRQEAYNKKLFWITVVDTLWQSIVIFYGAFFAYWGSTIDVASIGDLWTLAVVIVVNIHLAMDVIRWNWIAHVSIWGSIAATFISIMIIDAIPTLPGYWAIFHALGTGSFWLCLLGIIITALLPRFMVKYIYQYYFPDDIQISREAEKVEASRVVVGGDIEMHPIPVGPPRS 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02237 1186 PRINTS P-type cation-transporting ATPase superfamily signature 884 903 - -
Accr1g02237 1186 PRINTS P-type cation-transporting ATPase superfamily signature 466 480 - -
Accr1g02237 1186 PRINTS P-type cation-transporting ATPase superfamily signature 767 777 - -
Accr1g02237 1186 FunFam Phospholipid-transporting ATPase 722 924 - -
Accr1g02237 1186 Pfam E1-E2 ATPase 177 422 - -
Accr1g02237 1186 FunFam Phospholipid-transporting ATPase 150 319 - -
Accr1g02237 1186 FunFam Phospholipid-transporting ATPase 570 703 - -
Accr1g02237 1186 CDD P-type_ATPase_APLT_Dnf-like 94 1044 - -
Accr1g02237 1186 SUPERFAMILY HAD-like 461 930 IPR036412 -
Accr1g02237 1186 Pfam Phospholipid-translocating ATPase N-terminal 78 143 IPR032631 -
Accr1g02237 1186 Gene3D - 151 319 - -
Accr1g02237 1186 SFLD p-type atpase 450 935 IPR044492 -
Accr1g02237 1186 ProSitePatterns Signal peptidases I signature 3. 431 444 IPR019758 GO:0004252|GO:0016020
Accr1g02237 1186 MobiDBLite consensus disorder prediction 1 63 - -
Accr1g02237 1186 PRINTS Sodium/potassium-transporting ATPase signature 961 981 - -
Accr1g02237 1186 PRINTS Sodium/potassium-transporting ATPase signature 459 480 - -
Accr1g02237 1186 Gene3D - 570 703 IPR023299 GO:0000166
Accr1g02237 1186 SFLD C1.7: P-type atpase like 450 935 - -
Accr1g02237 1186 Gene3D - 722 924 IPR023214 -
Accr1g02237 1186 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 68 1164 - -
Accr1g02237 1186 Pfam Cation transport ATPase (P-type) 574 650 - -
Accr1g02237 1186 NCBIfam phospholipid-translocating P-type ATPase 92 1158 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Accr1g02237 1186 MobiDBLite consensus disorder prediction 1 42 - -
Accr1g02237 1186 ProSitePatterns E1-E2 ATPases phosphorylation site. 468 474 IPR018303 -
Accr1g02237 1186 Pfam Phospholipid-translocating P-type ATPase C-terminal 912 1151 IPR032630 -
Accr1g02237 1186 NCBIfam HAD-IC family P-type ATPase 855 969 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g02237 1186 NCBIfam HAD-IC family P-type ATPase 398 503 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr1g02237 1186 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 472 739 IPR023299 GO:0000166
Accr1g02237 1186 SUPERFAMILY Calcium ATPase, transduction domain A 175 316 IPR008250 -
Accr1g02237 1186 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 1151 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02237 Accr-Chr1 56985882 56990892 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02237 1 1185 Primary Pumps ATPases AT5G04930 68.945 0.0 1708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02237 K14802 - gmx:100784988 1819.67