Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr1g02236 | ATGTCAACAGTGAGAGATCCTGCTATAAAGCTATTTGGTAGAGATATTCCTCTAGATTCAACACGCAACACCGATTCGCCTCAAGTTCTGAACAGGTATGATGAATCAACAATTGAAGGAAATGTTCCTTTCAGAGATGGCAAGCAGCATGATCCTATTGAAGAAGCAGACGGAAACGTTTATAGAAGTCCTACTTCTGAAGTGGAAGCTAAAGTAGTTCATAGAACTAAGGACTACAAGGCTGGTAATAAAGATATGGATCATCAAGAAAAAGTTTTCAAGAAACCGGATAAGGTGCTGCCTTGTCCTCGCTGTAACAGCTTGGACACTAAGTTTTGCTATTTCAATAATTACAATGTCAATCAACCTAGGCATTTCTGCAAAAACTGCCAAAGATATTGGACAGCGGGGGGCATAATTAGAAATGTTCCCGTGGGGGCCGGAAAGCGCAAAAATAAACATTCGCCATTACCTGTTGCCCAAGATATAGCATCTGTTGCCCACACAGAGTCCAATTCTCTTCCTACAGCTTCAGTGCCTAATGGAGGAATAGGAAATAGCCCTAGAATTGGTGAGGAAGCTCCTCTTTGTGAATCCTTGGAAACTGTGTTAAATCTAAAAGGCCAAAAAAAAACTGGAGTTGATTCCACTGTTGGTAATGATAGTGAGGAGAGTGATTTTGAATCCAGGGAAAAGGAATGCTCAGAAAATGAAATTGAGCAGGTAGGTTTGCAACAACACTTAAATGGTTTTAATCCTCTACATCCACTTCATTATTATCCTGTACCTCCCTGGGCGTACCAATGGAATCCATGTTGGAATTCGATGGTATTTAGACCCGGTCCTGCTTATATGGGCTCTGCAACTATGATGGCAGTCCCAGGTTTCACTGCACCAACAATAGAATTATCGGCGGCACCCTTTTATTCGAGTCCCGTGCCAAGCTGGACTGGCCAGAAGGAAGAGTCTCCATTTGCTGGGTCTACATTTAGTGCTTGTTCAGGGACTAAGTCTCCAACATTGGGAAAACATTCAAGGGATGTAAGTACTCAGGCAGGTGATGCAATGAGACAGAATCTTTGGGTACCTAAGACACTGAGAATTAATGACCCAGAAGAAGCTGCAAGGAGTTCTATATGGTCTGCTTTTGGTACAAAGATGGAACATAGCAAACCGATTATCAAAGGCAGTGTTTTTAAATCTTTTGAACCTAAGTCAGAAGGTGCAAGATCTCATACTTCAAATAGTGACCAAATTCTGAGTGCAAACCCTGCTGCTTTTTCTCGCTCAGAATCATTTCAGGAGAGAATGTAA | 1314 | 0.4193 | MSTVRDPAIKLFGRDIPLDSTRNTDSPQVLNRYDESTIEGNVPFRDGKQHDPIEEADGNVYRSPTSEVEAKVVHRTKDYKAGNKDMDHQEKVFKKPDKVLPCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGIIRNVPVGAGKRKNKHSPLPVAQDIASVAHTESNSLPTASVPNGGIGNSPRIGEEAPLCESLETVLNLKGQKKTGVDSTVGNDSEESDFESREKECSENEIEQVGLQQHLNGFNPLHPLHYYPVPPWAYQWNPCWNSMVFRPGPAYMGSATMMAVPGFTAPTIELSAAPFYSSPVPSWTGQKEESPFAGSTFSACSGTKSPTLGKHSRDVSTQAGDAMRQNLWVPKTLRINDPEEAARSSIWSAFGTKMEHSKPIIKGSVFKSFEPKSEGARSHTSNSDQILSANPAAFSRSESFQERM | 437 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr1g02236 | 437 | Pfam | Dof domain, zinc finger | 97 | 154 | IPR003851 | GO:0003677|GO:0006355 | |
Accr1g02236 | 437 | MobiDBLite | consensus disorder prediction | 169 | 191 | - | - | |
Accr1g02236 | 437 | MobiDBLite | consensus disorder prediction | 408 | 430 | - | - | |
Accr1g02236 | 437 | MobiDBLite | consensus disorder prediction | 209 | 231 | - | - | |
Accr1g02236 | 437 | MobiDBLite | consensus disorder prediction | 404 | 437 | - | - | |
Accr1g02236 | 437 | MobiDBLite | consensus disorder prediction | 40 | 57 | - | - | |
Accr1g02236 | 437 | MobiDBLite | consensus disorder prediction | 169 | 183 | - | - | |
Accr1g02236 | 437 | ProSitePatterns | Zinc finger Dof-type signature. | 102 | 138 | IPR003851 | GO:0003677|GO:0006355 | |
Accr1g02236 | 437 | MobiDBLite | consensus disorder prediction | 40 | 59 | - | - | |
Accr1g02236 | 437 | PANTHER | CYCLIC DOF FACTOR 2 | 4 | 436 | IPR045174 | GO:0003700|GO:0006355 | |
Accr1g02236 | 437 | ProSiteProfiles | Zinc finger Dof-type profile. | 100 | 154 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr1g02236 | Accr-Chr1 | 56969540 | 56971905 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr1g02236 | 4 | 435 | C2C2-Dof Transcription Factor Family | AT5G39660 | 34.127 | 1.18e-64 | 213 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Accr1g02236 | zf-Dof | 6.7e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr1g02236 | - | - | ccaj:109811729 | 460.685 |