Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02222 ATGATGGACAGAGTCCGTGGCAAAGGAGATGAATTAAAGAAGTCTCCGTCGCTGCATTCCTCATCTTCAGCTGTCGCTGTAGCTATCAAAGGTAACAAGAAAAGCAAGCATATGGTGCAATGGGCACTGGATACTTTTGTTCCCGAGGGAAGAATTGTGTTTAAGCTGATACATGTCCATTCAGAAGCTTCTTTTAAGAAGGAAATAGAGTGGAAGACAAGTGTAATGCTCCTACCTTACAAGAAAATGTGTGAGCAGAGAAAGGTTCATGTTGATATTGTAATGATTCAATCTGATGATGTAGAAACTGCAATAGCAGAGGAAGTTGCCAAGAGTTCTATAACCAACCTGGTTATAGGGGCTTCATCTCATGCCATATTTACTAGTAAACTGAAGGGTTTATCTGCGAAAATATCATCATGCACTCCAAGATTTTGTACAGTCTATGCTGTTTCCAAAGGGAAGCTGTTTTCTTCACGGCCATCAGATGTAGAGATTGATGAAAGCTTAATAGATGACAGTAGTGAAACCAGTTGTTCCACCAATAGCTCATTGAACTCTGCGTCCACCTCTCAGATAGACTATGGTTCAGTTGGATCATACACTCCCATAAATTCCTCTTCCCTAGCGGCACAGAGATATCAAGCTCTTTCAGCCATTAATCAGACCCGTCAGAGCACAAAAGCTGGTTTAATTGAAAATAACCACTCTAGAAGCCATTCTCTAGATCTTGGCATAGAGCAAACTGCTATTTATTCTTCTACAAGAAATTCAGATATTGACTATGCTTTGAGCCGGGTCTCTAGCTGCAAAAGCAATCTATCAGATGGTGAATCTTGGAATTGTTATCAAAATCCCACCATGGATGTATCACATGCTACTGTGTCACCTGATAAAGAGGAAAGTTTTAACCTTGAGCTGGAAAGGTTGAGAATTGAACTAAAGCATGCCCAAGGAATGCATATGGTAGCTCAAAGACAGAATATTTATGCATCACAAATGTTGAACAATCTAAGTAAGAAGAGAATGGAGGAATCCGTGAAATTGAAGGAAATTATTGCTAAGGAAGACATGGCCAAAAAATTAGTAACGAAGGAGAGAGAGAAATGTGAAGCAGCAGAAAGAGAAGCTGCTTATTTGAAAAGAAGTTCCGAAGAGGAAGCCTTTGACAGAAGAGAAGCAGAGATGAAAGCTGTGGAAGCTGCTGAAAGGAATGAAAAGCTAGAGGATGCTCTTAGTGGTTCCATGCTTCAGTATAAGAAGTTTACATGGGATGAAATAATTTCAGCTACCACATCATTCTCTGAAGATCTAAGAATTGGAAAGGGAGCTTGTGGAACAGTTTACAAGTGTGATTTGTATCATACACCTGTGGCAGTAAAAATTCTTCACTCTAATGAGGACCACATTATCAAGCAACTCCAACAAGAGTTGGAAATACTGAGCAGAATTCGTCATCCAAATTTACTTCTCCTTCTCGGGGCTTGCCCCGATCATGGATGCCTTGTGTATGAATACATGGAGAACGGTAGCTTAGAGGACACTTTACTCCAAAATAAAAGTAATATCACAATTCCATGGTTCAAGAGGTACCAAATTGCATGGGAAGTAGCCTCTGTTCTTGCCTTTCTTCATAGCTCAAAGCCCAGACCCATCGTCCATCGTGATTTGAAACCGGCAAACATCTTGCTGGATGGGAATCTCGTGAGCAAGGTTGGCGATATAGGCCTCTCTACATTACTCCATTCAGATACTCTGTCTACAACGTTCAAGGACACAGAGCCTGTTGGAACACTCTCCTACATAGATCCTGAGTACCAAAGGACAGGGCAATTATCTCCGAAATCTGATGTTTATGCTTTTGGAATGGTGATCCTACAGTTGTTAACTGCAAAACCAGCTAGGGCACTTGCGCATTTAGTAGAAACAGCAATTGAAAAGGGAAATTTAGCAGAAATGTTGGATCCTACGGCAGGGAATTGGCCATTTCAGGAGACTTTGGACTTAGCTCGATTAGGCCTAAGCTGTGCAGAACTTCAGCGTAGAGACAGGCCTGATTTGAAAGACCATGTACTTCCCATACTGGAGAGATTAAAAGAAGTCGCTGATAAGGCTCAACATTCTGCCACAGTTGTTTCTGTTAAATCTAGACCCCCTAATCACTTTATCTGCCCAATACTTCAGGATGTGATGGAGAATCCTTGTGTTGCTGCTGATGGTCATACTTATGATTACAAAGCCATTGTGACATGGCTACAAACCCATGACAAATCACCAATGTCAAATGTGCCATTACCTCATAAGAATCTGATTCCGAATTACACGCTTCTATCTGCTATTATGGAGTGGAAATCCAAACAAAATTGA 2367 0.4106 MMDRVRGKGDELKKSPSLHSSSSAVAVAIKGNKKSKHMVQWALDTFVPEGRIVFKLIHVHSEASFKKEIEWKTSVMLLPYKKMCEQRKVHVDIVMIQSDDVETAIAEEVAKSSITNLVIGASSHAIFTSKLKGLSAKISSCTPRFCTVYAVSKGKLFSSRPSDVEIDESLIDDSSETSCSTNSSLNSASTSQIDYGSVGSYTPINSSSLAAQRYQALSAINQTRQSTKAGLIENNHSRSHSLDLGIEQTAIYSSTRNSDIDYALSRVSSCKSNLSDGESWNCYQNPTMDVSHATVSPDKEESFNLELERLRIELKHAQGMHMVAQRQNIYASQMLNNLSKKRMEESVKLKEIIAKEDMAKKLVTKEREKCEAAEREAAYLKRSSEEEAFDRREAEMKAVEAAERNEKLEDALSGSMLQYKKFTWDEIISATTSFSEDLRIGKGACGTVYKCDLYHTPVAVKILHSNEDHIIKQLQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDTLLQNKSNITIPWFKRYQIAWEVASVLAFLHSSKPRPIVHRDLKPANILLDGNLVSKVGDIGLSTLLHSDTLSTTFKDTEPVGTLSYIDPEYQRTGQLSPKSDVYAFGMVILQLLTAKPARALAHLVETAIEKGNLAEMLDPTAGNWPFQETLDLARLGLSCAELQRRDRPDLKDHVLPILERLKEVADKAQHSATVVSVKSRPPNHFICPILQDVMENPCVAADGHTYDYKAIVTWLQTHDKSPMSNVPLPHKNLIPNYTLLSAIMEWKSKQN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02222 788 SUPERFAMILY Protein kinase-like (PK-like) 416 689 IPR011009 -
Accr1g02222 788 CDD STK_N 25 154 - -
Accr1g02222 788 Coils Coil 391 411 - -
Accr1g02222 788 Gene3D HUPs 22 152 IPR014729 -
Accr1g02222 788 SUPERFAMILY RING/U-box 716 787 - -
Accr1g02222 788 SMART serkin_6 434 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02222 788 Coils Coil 356 383 - -
Accr1g02222 788 PANTHER OS02G0152300 PROTEIN 25 782 - -
Accr1g02222 788 ProSiteProfiles Protein kinase domain profile. 434 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02222 788 Gene3D Phosphorylase Kinase; domain 1 418 506 - -
Accr1g02222 788 Coils Coil 307 327 - -
Accr1g02222 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Accr1g02222 788 Gene3D Transferase(Phosphotransferase) domain 1 507 717 - -
Accr1g02222 788 SMART Ubox_2 721 783 IPR003613 GO:0004842|GO:0016567
Accr1g02222 788 CDD RING-Ubox_WDSUB1-like 719 773 - -
Accr1g02222 788 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 718 788 IPR013083 -
Accr1g02222 788 Pfam U-box domain 719 787 IPR003613 GO:0004842|GO:0016567
Accr1g02222 788 Pfam Protein kinase domain 437 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02222 788 ProSiteProfiles U-box domain profile. 717 788 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02222 Accr-Chr1 56829910 56836175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02222 22 785 U-box Gene Family AT4G25160 46.420 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Accr1g02222 Pkinase 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02222 - - gmx:100801699 1014.6