Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02216 ATGGCAACTTGTTGTTCAAGTTGCTCCAAGTTAACACCAAGTTCTTTTCTTCCACGCTCCACTGTCGTACCTTACCTCTTTAGTGTCCCTTCTAGTTCTGTGAGGCCTGTTAATCTCCGTTGTTTCTATAATTTTCAAAGACTTTGGCTTCGATCAAGCCGTCGTTGCGGTCCTCTACTAGCTACGTCGTGCAGTAATTTTGAGTCGGTAGAGCTGCAAGAAGCCCAGATTGCTGTTTCAAAACTACTTCAAGAATTCGGGGTGTCTGAGGAGGAATCTAATTCTATAGCATCTAATTCACCAAAGTATTTGAGAATGCTGGTTGATGAAGTTCGGGAAAAGGACGAACTTTCAATGTGGGAGAAGCAAATTGATGCGTTCCAGGAGAAAGTGGTTCACATTGCTAGGGAGAAAGGTGATAATGGAAAAGTTGCATACTTGGAGAGTCTCGGTTTGAGCCTCTCTTCTGCTATGAATGTGGCCAGATATCTGTCTGCAGAAACACTTGCAACACTCATTCTTAAGGTTAAGTGTATGAAGGAATTATTCTTTTCTGGCAGTGAAAGTTACGAGTTTCCGGTCAGAAGAGTTCGCAATATGATGATGCAGATATCAATTCCTATTGATGAAGATCTGCAGCAGAGTTTGTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTGAACATGTTGAATTCCAGCGATACTGCTTTTGATTGTTTAATTGAATCATTTCCCCGTCTGCTTTTGTTATCAGTAAAATCTCACATGAAACCGTTAGTGGAGTTTCTTGAGAGTGTTGGAATCCAAAGAGGTCTCATCAGAAATATACTGTTGACATTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAACTCGAGTACTAGCCTTGAAGGAGATTGGTGGTGTAAATGACAATTATGCTAAGATTCTGCTGAAATATCCTTGGATACTATCTAGAAGCATTCAAGACAATTATTGGGAGGTCCTCTCTTTATTTGATTCAGAGAAGGTTCCCAAGGCATTTGTTGATCGTGCAATCAAAAGCTGGCCCCATATATTGGGTTGTTCATCTAACAAGCTAAAGCTGATGATTGATCAGTTTGGTGAAATAGGAGTTCAACACAAGAAGTTGGGTCAAGTTATTGCTAAAAGTCCTCAGCTACTGTTACAGAAGTCGCAAGATTTTCTCCAGGTTGTTCTGTTCTTTGAAAATATGGGGTTTGATAGACAAACAATTGGGACAATACTGGCTCGCTGTCCTGAAATCTTCGCCGCTTGCCCTACCAAAACTCTCAAGAGAAAGATTGAGTTCCTACATGCTATTGGTGTTTCTGAAATTTTCCTTCCTCGGGTTATAAGAAAGTGTCCAGAACTTCTTGTGTCTGACCCAGACAGAACTATGCTACCAAGATTAATGTACTTGATGAAGTTAGGACTATCTGAAAGAGACATTGGATTCATGGTACGGTCATTTTCTCCTCTGCTTGGATACAGCATTGAGGAGGTTCTGAGACCAAAAGTAGAATTCCTGGTGAACACAATGGAGAGGCCAGCGAGGGACGTGGTGGGGTACCCCAGGTACTTCAGCTACTCTCTAGAGAAGAAGATAAAGCCAAGATATTGGGTTCTCAAGGGAAGGAATATTGAGTGTAGTTTGAAGGATATGTTGGCCAAAAATGATGAAGAATTTGCTGCTGAATATATGAATCTCCCATCATCTACTCATTCTTGA 1743 0.4102 MATCCSSCSKLTPSSFLPRSTVVPYLFSVPSSSVRPVNLRCFYNFQRLWLRSSRRCGPLLATSCSNFESVELQEAQIAVSKLLQEFGVSEEESNSIASNSPKYLRMLVDEVREKDELSMWEKQIDAFQEKVVHIAREKGDNGKVAYLESLGLSLSSAMNVARYLSAETLATLILKVKCMKELFFSGSESYEFPVRRVRNMMMQISIPIDEDLQQSLSFFEKVEARRGGLNMLNSSDTAFDCLIESFPRLLLLSVKSHMKPLVEFLESVGIQRGLIRNILLTFPPSLLWNIEVFKTRVLALKEIGGVNDNYAKILLKYPWILSRSIQDNYWEVLSLFDSEKVPKAFVDRAIKSWPHILGCSSNKLKLMIDQFGEIGVQHKKLGQVIAKSPQLLLQKSQDFLQVVLFFENMGFDRQTIGTILARCPEIFAACPTKTLKRKIEFLHAIGVSEIFLPRVIRKCPELLVSDPDRTMLPRLMYLMKLGLSERDIGFMVRSFSPLLGYSIEEVLRPKVEFLVNTMERPARDVVGYPRYFSYSLEKKIKPRYWVLKGRNIECSLKDMLAKNDEEFAAEYMNLPSSTHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02216 580 FunFam Mitochondrial transcription termination factor family protein 362 575 - -
Accr1g02216 580 SMART mt_12 489 521 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 SMART mt_12 276 306 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 SMART mt_12 522 553 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 Gene3D Transcription termination factor 3, mitochondrial 360 579 IPR038538 -
Accr1g02216 580 PANTHER CGI-12 PROTEIN-RELATED 144 365 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 Pfam mTERF 262 568 IPR003690 GO:0003690|GO:0006355
Accr1g02216 580 Pfam mTERF 79 296 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr1g02216 mTERF 1.4e-93 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02216 K15031 - qsa:O6P43_022473 686.026