Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02214 ATGAAGTCCGATTCACTAGAGTACTGGAGGAATTACTTTCAAACTGTAAATTGTGATATATTTGATAAAATTAAACACGCGATCACAGTCGCGGTTTCCGATTGTCCTAATGAATTTAGATTACGAAGAGACGAGATTGCAGAGCTTTTGTTTTCTAGAGAAGATGGAGGTTGTAAGAGTGGCTTTGATGGAGAAGCTACAAAATTAGAAGCAGGATCTAGTAAAGAGAGCAAGGCCAATAGTGGCAGAGACGGTCACGAAGGGATGAACAAGAACCAAGTTAGTAATTTTAGTTCTGGACAAGCTGATGAGGTTTTGAGGATCAAAGAGATTCTTCATAACAGCAAGGATGAGACTGATGCAGTGCTATTTGAGTCATTGAGGAGGCTCCAGCCACTGGCACTGACTGTGGACCTTCTTAAGGAAACTGAGATTGGAAAGGCTGTCAATCCTCTCAAGAAGCATGTCTCAAAGGAGATCTGTCAACTTGCACGAACTCTTATCGATGGTTGGAAAGCAATGGTAGATGAATGGATTAAGTCCACAGAACCAATCAACATTGATTCTAGCCCTAGCAGGCAAACAAATTCCAACCTGCCACAAAAAAACAACACAGGACCAAAGATGCAAAAGAAATATGTTATGCTTCGAAGGAAGCCTCTTATTTCTCAGCAAGTTTGTCAAAAGTTCAAGTGTTTAGATGATGTTTCAATCCAAGCAAAACTAGAAGCCACGAAGAGGAAACTTCACGACTCTTATCAACAAGCTGCAAACGCGAAGAAGCAACGAACAATACGGGTTATCGAGTTGGATGATCTTCCAAAGCCAAAGCAAGGGAATATAGGCCCCCGAGATCCACACTCGAAGCTTTTGGGACGAAGACGATAG 888 0.4178 MKSDSLEYWRNYFQTVNCDIFDKIKHAITVAVSDCPNEFRLRRDEIAELLFSREDGGCKSGFDGEATKLEAGSSKESKANSGRDGHEGMNKNQVSNFSSGQADEVLRIKEILHNSKDETDAVLFESLRRLQPLALTVDLLKETEIGKAVNPLKKHVSKEICQLARTLIDGWKAMVDEWIKSTEPINIDSSPSRQTNSNLPQKNNTGPKMQKKYVMLRRKPLISQQVCQKFKCLDDVSIQAKLEATKRKLHDSYQQAANAKKQRTIRVIELDDLPKPKQGNIGPRDPHSKLLGRRR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02214 295 MobiDBLite consensus disorder prediction 69 85 - -
Accr1g02214 295 MobiDBLite consensus disorder prediction 184 209 - -
Accr1g02214 295 ProSiteProfiles TFIIS N-terminal domain profile. 103 178 IPR017923 -
Accr1g02214 295 CDD TFIIS_I 102 176 - -
Accr1g02214 295 SMART TFS2_5 102 177 IPR003617 GO:0005634
Accr1g02214 295 Coils Coil 242 262 - -
Accr1g02214 295 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 94 187 IPR035441 -
Accr1g02214 295 Pfam TFIIS helical bundle-like domain 127 175 IPR017923 -
Accr1g02214 295 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 188 279 IPR044805 -
Accr1g02214 295 MobiDBLite consensus disorder prediction 270 295 - -
Accr1g02214 295 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 101 185 IPR035441 -
Accr1g02214 295 MobiDBLite consensus disorder prediction 184 208 - -
Accr1g02214 295 MobiDBLite consensus disorder prediction 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02214 Accr-Chr1 56736532 56737867 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Accr1g02214 Med26 5.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02214 - - zju:107431544 237.269