Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02209 ATGGGGATAGATCTTGAGCAGCCATCTGTAGAATGTCATGAGGAAGACAGTAGGAATTCTGTAATTGCTGATGTGTTTGATGGAATGGATGGTGTAAATAATAGCAATGAACCCAGAAGTTCATTAAAAGTTGTTGGAAATGACAAGGAGAATGCAGGACTAGGTATCAATGCTGATATATCAAATTATGGAAATGAAGGTTATACTGGACAAGGAACCAACTTGAATTCTTCAAAATTACCAGAGCCTCATGATGGAATGGAATTTGTTTCAAAGGAGGAGGCATTTTCATATTATAAAGATTATGCGAAATCTGTGGGATTTGCTGCTATTATAAAAGCTAGCCGTCGGTCTAGAATATCTGGAAAATTTATTGATGCAAAATTTGCATGTACCAGATATGGAAACAAACAAGAACCCTGCGGAGCTGAAACTTCAAATTCTCTTTCAAATACAGATAATATACCAAGTATTCCTGTAAAAAGGAAACGGGGTAGGGTGAACTTGTCTTGGGCAAAAACAGATTGCAAGGCCTGCATGCATGTTAAAAGAAGGCAAGATGATAGGTGGATCATCTGTAGTTTCATAAAAGAACATAACCATGAAATTTTTCCTGACCAAGTCTATTACATTAGGGGACGTGGTAGCAGGGTTAGAACAAAACAGATGTGTGTTACCATGCCCAGAAAATCTGATGGATGTAAGAAAGTTGACAATGGAAAAGGTAACAGTGGAAACCATTCAGGTAATAGACAGCATCTGGCTTTAGATGAAGCAGATGTCCATGCTCTGCTTGACCATTTTATGTGTATGCAAGGCGAGAATCCTAGTTTCGTTTATGCTATAGATCTGAATGAAGAGCAGCAATTGAGAAGTGTTTTCTGGGTTGATGCAAAAAGCAGGCTTGATTATGGACACTTTGGTGATGCGATTCTTCTTGACACCACACATATCAAGAATGAATATAAACATCCTATTATTCCCTTTATTGGTGTGAACCATCACTATCAATTCTTGTTGCTAGGATGTGCTATTGTGTCTGATGAGTCTAAATCAACTTATACATGGCTGTTACAGACATGGTTGAGGGCAATGGGTAGATGTGCTCCAAAGGTAATACTTACAGATCAAGACAGAGCTCTAAAAGAAGCTATTGCTGAAGTTCTTCCAGGGGTTCATCATTGTTTTTGTTTGTGGCATATCCTGAGCAAGATTCCAGAAAAATTAAGTCATGTGATACAGAAGCATGCAAATTTTATGACTAAATTTAACAAATGCGTGTTTAAGTCTTGCTCAAATGAACAATTTGAGAAGCGATGGTGGAAAATGATTAGGAGATTCAATTTAAGTGATGAGAATTGGTTATGCTCAGTTTATGAGGATCGTGAACACTGGATGCCTAGTTATACCAGAGGCAAATTCTTAGTAGGAATATCTACAAGGAAACGAGAAGAAGCTATAAACTGTTTGTTAGACAGACATGTGCAGAGGAAAACTACATTGAAGGAGTTTTTAGATAAATACAAAATGATATTACGAGGGAAGTGTGAAGAGGAAGCAAAAGCAGATTTTGAAACTTTTCATAAACAACCAGCATTAAAATCCCCCTCACCTTTTGAGAAACAAATGGCTCCATTGTACACACGAACTATATTTAAGAAATTCCAGAGTGAGGTCTTGGGAGTTGTTGCTTGCCATCCAAAAATGGAAAGTGAAAATGGACCAATAAAGATGTTTAGGGTTCAAGATTTTGAAGATAATCAACAATTTACTGTCTCATGGAACAATATAACTTCTGATACATCTTGTTCATGCCATTTTTTTGAATTCAATGGTTTTCTTTGTAGGCATGTAATGATTGTTCTGCAAATCTCTGGGGTACACAATATCCCATCTCAGTATATACTAAAACGATGGACAAAAGAAGCAAAGAATAGACAGATAGTAAGAGAGTTGTCTGATGTGGTGGACTCTAGGAGCAAACGCTGTACTAATCTTTCTCAACTAGCATTTAAGTTGGGTGATGAAGGGTCTTTATCACAAGCGAGTTACACTACTGCTGTAAATGCATTGGAAGAAGCTTTGAGAAAGTGTGAGAACATAATCAACTCAACTAAGAGTGTCATGGAACCAATCTTCCCGATTCCTGGTTCTAATCATGTGAATATGAGTAGCTCTGTTTGTAATATGAACAGGAAGGACAATTCATTGAAGAAAAGACAGGCACTGCCCGAGCCGAATATCATTGCTATAGGAATTGATAGCAGCTGGCAGCAAATGGCCAATTCTACAAGAGCAGCAGGCCTTGATTGTTCTTATGAATCACAGCAGAACATTCAAGAAATGGATCAGCTGAACTCAAGATCTCAGAACTTGGATGGCTATTATGCCTCTCAACAAATTGTTTCCGGAATGGGACAATTGAACACAATGGCTACCAACGGTACTGATTTTCACAGCAACCATAGCGTCCAAGGCCTGGCAGAGTTACATTTCAGACAACAAACTAACCCGAATTGTTTTGATCTTCAAGATGGCTTGCGAAATATGGAACAGTCCTCTGAAGGATCCTCACATTTACTTGAGATTGGAACCAAACAACTCAATTCAAGGCACCTTTTGCGATAG 2628 0.3813 MGIDLEQPSVECHEEDSRNSVIADVFDGMDGVNNSNEPRSSLKVVGNDKENAGLGINADISNYGNEGYTGQGTNLNSSKLPEPHDGMEFVSKEEAFSYYKDYAKSVGFAAIIKASRRSRISGKFIDAKFACTRYGNKQEPCGAETSNSLSNTDNIPSIPVKRKRGRVNLSWAKTDCKACMHVKRRQDDRWIICSFIKEHNHEIFPDQVYYIRGRGSRVRTKQMCVTMPRKSDGCKKVDNGKGNSGNHSGNRQHLALDEADVHALLDHFMCMQGENPSFVYAIDLNEEQQLRSVFWVDAKSRLDYGHFGDAILLDTTHIKNEYKHPIIPFIGVNHHYQFLLLGCAIVSDESKSTYTWLLQTWLRAMGRCAPKVILTDQDRALKEAIAEVLPGVHHCFCLWHILSKIPEKLSHVIQKHANFMTKFNKCVFKSCSNEQFEKRWWKMIRRFNLSDENWLCSVYEDREHWMPSYTRGKFLVGISTRKREEAINCLLDRHVQRKTTLKEFLDKYKMILRGKCEEEAKADFETFHKQPALKSPSPFEKQMAPLYTRTIFKKFQSEVLGVVACHPKMESENGPIKMFRVQDFEDNQQFTVSWNNITSDTSCSCHFFEFNGFLCRHVMIVLQISGVHNIPSQYILKRWTKEAKNRQIVRELSDVVDSRSKRCTNLSQLAFKLGDEGSLSQASYTTAVNALEEALRKCENIINSTKSVMEPIFPIPGSNHVNMSSSVCNMNRKDNSLKKRQALPEPNIIAIGIDSSWQQMANSTRAAGLDCSYESQQNIQEMDQLNSRSQNLDGYYASQQIVSGMGQLNTMATNGTDFHSNHSVQGLAELHFRQQTNPNCFDLQDGLRNMEQSSEGSSHLLEIGTKQLNSRHLLR 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02209 875 MobiDBLite consensus disorder prediction 851 875 - -
Accr1g02209 875 MobiDBLite consensus disorder prediction 851 865 - -
Accr1g02209 875 ProSiteProfiles Zinc finger SWIM-type profile. 590 626 IPR007527 GO:0008270
Accr1g02209 875 SMART 26again6 601 628 IPR006564 GO:0008270
Accr1g02209 875 Pfam SWIM zinc finger 590 622 IPR007527 GO:0008270
Accr1g02209 875 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 700 IPR031052 GO:0006355
Accr1g02209 875 Pfam MULE transposase domain 311 403 IPR018289 -
Accr1g02209 875 Pfam FAR1 DNA-binding domain 97 205 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02209 Accr-Chr1 56705423 56709156 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr1g02209 FAR1 3.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02209 - - pcin:129315780 1445.64