Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02179 ATGGAGTTCGGTTCACTAGAATATTGGAGGAACTACTTTCGAACGGCTAATACTGATATATTCAATGTAATTGACCACGCTATTATGGTGGCGATTTCCGATCATCCGAACGAATTTAGATTACGAAGGGACCAGATTTCGGAACGTTTGTTTTCTTGGGGATTGACTCGTTCTGTGGGGTGTAATCCATTAAGGTCTGTGGTTTCCGACGACGATAAGGAAGATGGAGGTTGTAAGTGTAGTTTTAGTCGAAAAGCTACTGAATTAGAAGGAGGCTCTACTAAAGAGAGAAAGGGCAAGAGTGGCAGAGACAATGAGATTAATAGGACCCAAGTTAGTAGTTTCAGTTTTGGAGAAGATGAGGGATTCATCGATGAGATTGAAAAAGAATCTATGATAGTTGCGGAGATCTTGAGGATCAAAGAGATTCTCCGTATGGAAAAGGCTGATTCAGTGTTGTTTGAGTCACTAAGGAGGTTGCAGCCGCTGGCACTGACGGTGGACCTTCTTAAGGAAACTGAGATTGGAAAGGCTGTCAATCCTCTCAAGAAGCACAGCTCCAAGGAGATCAGTCAACTGGCGCGAACTCTTATCGATGGCTGGAAAGCAATGGTAGATGAATGGATCAAGTCAACAGAAGCTATAGAAGCAAAAGGCGCCCCAGATTCAATTAATGCATCAGTCATTAATGAAGAGGAAGAGCTTCCTTCTCCTCCTCTGGACGAAGTTGCTATGAGACAGAGTAAACCAGTCTGCACTGATTCTAGCTCTAGCAGGCAACCAAAATGCAGCTTACCACAAAAAAGCAACACAGGACCAAAGATGCAGCAGAAACCAAAGAAATATGTTATCCTCCGAAGGAGGCCTCTTGTTGCTCAGCAAGATTGTCAGAAATTCAAGTGCTCAGATGATGTTTCAGTCCAAGCAAAACTAGAAGCCACTAAGAGGAAACTTCATGACTCTTATCAGCAAGCTGCAAATGCCAAGAAACAGCGATCAATACGTGTTATCGAGTTGCATGATCTTCCAAAGCAAGGAAATATTGGTCCCCAATATCCACACTCCTCCAAGCTTTTTGGAAGGTTCTAG 1089 0.4325 MEFGSLEYWRNYFRTANTDIFNVIDHAIMVAISDHPNEFRLRRDQISERLFSWGLTRSVGCNPLRSVVSDDDKEDGGCKCSFSRKATELEGGSTKERKGKSGRDNEINRTQVSSFSFGEDEGFIDEIEKESMIVAEILRIKEILRMEKADSVLFESLRRLQPLALTVDLLKETEIGKAVNPLKKHSSKEISQLARTLIDGWKAMVDEWIKSTEAIEAKGAPDSINASVINEEEELPSPPLDEVAMRQSKPVCTDSSSSRQPKCSLPQKSNTGPKMQQKPKKYVILRRRPLVAQQDCQKFKCSDDVSVQAKLEATKRKLHDSYQQAANAKKQRSIRVIELHDLPKQGNIGPQYPHSSKLFGRF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02179 362 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 130 216 IPR035441 -
Accr1g02179 362 MobiDBLite consensus disorder prediction 232 279 - -
Accr1g02179 362 Pfam TFIIS helical bundle-like domain 157 205 IPR017923 -
Accr1g02179 362 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 126 218 IPR035441 -
Accr1g02179 362 CDD TFIIS_I 135 206 - -
Accr1g02179 362 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 246 347 IPR044805 -
Accr1g02179 362 SMART TFS2_5 134 207 IPR003617 GO:0005634
Accr1g02179 362 MobiDBLite consensus disorder prediction 249 276 - -
Accr1g02179 362 Coils Coil 311 331 - -
Accr1g02179 362 ProSiteProfiles TFIIS N-terminal domain profile. 135 208 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02179 Accr-Chr1 56272222 56274443 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Accr1g02179 Med26 4.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02179 - - qsa:O6P43_006336 330.102