Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02175 ATGGAGTATTTGGAGAGACGCTTATCAGCGTTGAAACCGAGTCATGTATATATCAGCTTTGACGACGACGATGACACTCACAAATTCGTCCGAAGCCTTTCGGCTGCTCTTAAAACACAAGGCTTCAGAATCTTCGGACATTATGAGAAGCGTGAAACAGGAGTCTCCAATAATTTTCCATATTATTACCAACTTATTGAAGCAATTGAAGAGTCGTGGATTTGGATCGTTGTGTTCTCCAAAAACTATGCTTCTTCATTTTGGTGTTTGCGGGAACTAGAGGAGTTTGCCGGGTGTCGTGAGTGGACATTCTGTCGAAAACGAAGTGTTCGAGCTCTAGGCCGTCCAATGGTTGAAGAACGTGAAACAAGATTCGAAGCAGACATAGACAAGGTGAAAAAATGGAGGCGAGCTCTGACATGCCGCTTTCATCTCCCCTGCTGCCGCCGGAGTGTAGGAGAAAGGACGATAGCAGTTTATTACGATGTAGATCCTAATTCCTTTCCTCAACAAGCATACCTGGAACATTCATCTGAGGAACGCCAACGGAGGCTGGAGGCTGTCAAACAAGTGACCTCTCTCTCTGCCTGGCCCGTACGGAATTATTCATCAGGGACACAAGTTATTCAAAAGATTGTTAAAGAAGTCAAGTCAAGAATAGATAAACAATTTTATGACTTTTTCGGATTTGTTGGAATACAGTCCCAAGTGGAAGAAGTAGAAAAGCTTTTGAATTTGAGAACAGATAATGAAGTTCAAGTTGTTGGCATTTGTGGTATGGCAGGATTAGGGAAGTCTACTATTGCTGCAGTTTTATATCTTAAGATCTTTCACTGTTTTGATGCTTTTTGTTTCCTTCCCAATGTAAGTGAACGTTTAAGGCAAGGTGACTTATCCCTACAAGAATTTCTTCGTAGAAATTTTGAGGCGGAAAATTCAGAGCATATTCTAGGCCAAAAGTTCTTAGCAAGCAGAAGGTCTCTCATAGTTGTCGATGGTGTCGATCTTGCGCAACATCTACAAGAGTTGAACTTAGTTGAAAAATCTAACTATTTTGGCGCTGGGAGTAGAATAATTATAACAACTAGAGATGAACAAGTCCTTCAAGAATACGAGGTTAATAGAGTTTATAGGCCTAAACTTTTGCTCAAGGATGAAGCTTTCAAACTTTTTTGCTCTATAGCTTTTCCAAAGGAATATCCTACCGAAGACTTCAAAGAGATGATAGATAGGGTATTGGAATATGCTGATGGCCTTCCACTAGCAATTGAAATATTGGGTTCATCCTTTTATGGAAAAGGAATTGCAGAATGGAGAAATTTCCTGGATAGAGAAGAAATTATACCTCCCGTTGAGATCATAATGGTGCTTAGAAAATGTTTTGATGAACTTGATGACATGAGTAAGGAAATGTTTTTGGACGTAGCTTGTTTCTTTGTAGGGAATGACATTAATTATGTGAAGGAAATTTTACATGATTGCATCAGTTGCAGTGTTGATGAAGGAATCAAACTTCTTATTCAAAAATCAATTATCACAATTGCAAATCAGAGGATAAAAATGCATGGCATGTTGCAAGTAGTGGGACGAGATATTGTTCGACGAGAAAGTCCAAATCAGCCTGAACTACGACATCGATTATACCTTTATAGTGACATCAAACATGTTATGGAGCAAGAAAGAGACATGGTGATAAATGATGTTGAAGCTATAGCCTTGGATTTGGAAGAGCCAAAAACGACTACATTGAGGATTGATGCTTTATCATATATGATCAACCTTAGATTGCTCATATTTCGTAATGTGAAATGTTTTGGAACCCTCGATAAACTTTCAAGCGAATTGCGATATGTTTCATGGCATCAATATCCTTTCACTGGTTTACCATCTAGTTTTCAGTCCAGTACACTAGTTCAATTGATCATGCCTGAAAGCAACATGACAGAAGTATGGAGGGGTAGGATGATGCTCCCTAAGTTGAGAAAAATGAATCTATGTGGCTCCAAAACTTTGACAAAGACGCCAGATTTTGGAGGGGTTCCGAATCTTGAGAGGCTAGAGCTTGAAGGATGCACTGGATTATTGCAACTTGATTCATCTATTTCGAAACTTTCAAAGCTCAAATTCTTGAATTTGAGAAAGTGCATCAATCTTGTTAGTATCCCTAATTCCTTGTTTTTTCACCACAACTCGCTGGAAGTCCTGAATCTAGCTGGCTGCTCTAAACTTGCATGTTGCTTGAAGTTTTCTCCAGTGAAGAGCTTGATACTTGTGGAAATGCTTAGTATTTGGCGTTTAGTTCGTTCATAG 2310 0.3926 MEYLERRLSALKPSHVYISFDDDDDTHKFVRSLSAALKTQGFRIFGHYEKRETGVSNNFPYYYQLIEAIEESWIWIVVFSKNYASSFWCLRELEEFAGCREWTFCRKRSVRALGRPMVEERETRFEADIDKVKKWRRALTCRFHLPCCRRSVGERTIAVYYDVDPNSFPQQAYLEHSSEERQRRLEAVKQVTSLSAWPVRNYSSGTQVIQKIVKEVKSRIDKQFYDFFGFVGIQSQVEEVEKLLNLRTDNEVQVVGICGMAGLGKSTIAAVLYLKIFHCFDAFCFLPNVSERLRQGDLSLQEFLRRNFEAENSEHILGQKFLASRRSLIVVDGVDLAQHLQELNLVEKSNYFGAGSRIIITTRDEQVLQEYEVNRVYRPKLLLKDEAFKLFCSIAFPKEYPTEDFKEMIDRVLEYADGLPLAIEILGSSFYGKGIAEWRNFLDREEIIPPVEIIMVLRKCFDELDDMSKEMFLDVACFFVGNDINYVKEILHDCISCSVDEGIKLLIQKSIITIANQRIKMHGMLQVVGRDIVRRESPNQPELRHRLYLYSDIKHVMEQERDMVINDVEAIALDLEEPKTTTLRIDALSYMINLRLLIFRNVKCFGTLDKLSSELRYVSWHQYPFTGLPSSFQSSTLVQLIMPESNMTEVWRGRMMLPKLRKMNLCGSKTLTKTPDFGGVPNLERLELEGCTGLLQLDSSISKLSKLKFLNLRKCINLVSIPNSLFFHHNSLEVLNLAGCSKLACCLKFSPVKSLILVEMLSIWRLVRS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02175 769 SUPERFAMILY "Winged helix" DNA-binding domain 452 557 IPR036390 -
Accr1g02175 769 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 142 IPR035897 -
Accr1g02175 769 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 744 IPR044974 GO:0006952
Accr1g02175 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 474 IPR027417 -
Accr1g02175 769 Gene3D - 227 376 IPR027417 -
Accr1g02175 769 SUPERFAMILY L domain-like 567 750 - -
Accr1g02175 769 ProSiteProfiles TIR domain profile. 12 220 IPR000157 GO:0007165
Accr1g02175 769 Pfam TIR domain 16 101 IPR000157 GO:0007165
Accr1g02175 769 SMART till_3 13 145 IPR000157 GO:0007165
Accr1g02175 769 Pfam NB-ARC domain 235 440 IPR002182 GO:0043531
Accr1g02175 769 Gene3D - 11 145 IPR035897 -
Accr1g02175 769 Gene3D - 146 226 IPR035897 -
Accr1g02175 769 PRINTS Disease resistance protein signature 254 269 - -
Accr1g02175 769 PRINTS Disease resistance protein signature 416 430 - -
Accr1g02175 769 PRINTS Disease resistance protein signature 702 718 - -
Accr1g02175 769 PRINTS Disease resistance protein signature 321 335 - -
Accr1g02175 769 Gene3D Ribonuclease Inhibitor 560 756 IPR032675 -
Accr1g02175 769 Gene3D - 382 472 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02175 Accr-Chr1 56246845 56249842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02175 671 758 WRKY Transcription Factor Family AT5G45050 35.955 9.84e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02175 - - pcin:129300842 864.759