Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02141 ATGGACCTGAAGTCAAATCACACTCCTATTCTTACTGATGCTGCACCCATGACAAAATCAAGATTGGGTGTGCATTCGAGTCGATTGCCTTATTCTCCTACAGGGGCAGCTTTTCCAACTAGTCCGCTTCTGACAATCCCCAGGAAGAAGACTGGAATTCTTGATGATGTCCGTTGTAGTAGTTGGCTGGATGCCATGAAATCATCTTCTCCTACAGCCATGAAGATAACAAAGGATATTAATCATGGTTTTGCATCATCTGATGCTGATAGTGCTTATAGTACCTGGCTGCTAAAGTATCCATCAGCACTCTCATCTTTTGAGCAAATCGCAAACCATGCAAAAGGCAAGAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTTCATGTCTGAAAATATGCGTGCTGCTGTTAAAAAAGTGGCAGAGCTTTTTCCCACTGCAATAATTAGTGGAAGAAGCTGTGACAAGGTACATGAATTTGTAGGACTAACTGAACTCTATTATGCTGGTAGCCATGGGATGGACATCATTGGTCCTGTGAGACAATCTGTATCTGATGACCATCCTAATTGCATTAGGTCTACTGACAATCAGGGAAAGGAAGTTAATTTATTCCAACCCGCTGCTGAATTCTTGCCCATGATTGATAAGGTGCTTGATTCCCTCATTGAATGTACAAAAGACATTAAAGGAGCAAAAGTTGAGAACAATAAATTTTGTGTCTCTGTACATTATCGCAACGTAGAGGAGAAGAATTGGAAAACAGTGGGGCAAAGAGTCTTCGATATTCTTAAGGACTATCCACGTTTGCGATTGACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAGTGATTGATTGGGATAAGGGGAAAGCCGTCACATTTTTACTTGAGTCTCTTGGGCTTAGCAACTGTGATGATGTGGTGCCTATATATGTTGGAGATGATCGGACCGATGAAGATGCTTTTAAGGTTTTGAGGGAGGGAAATAAAGGTTATGGCATCCTAGTTGCTTCCGCGCCGAAGGAAAGCAAGGCAGTCTACTCCCTTCGCGATCCATCAGAGGTTATGGAATTTCTCAAGACTCTTGTGGCTTGGAAGTCAGGCCACCTGAATAGTTTCGTGTAG 1164 0.427 MDLKSNHTPILTDAAPMTKSRLGVHSSRLPYSPTGAAFPTSPLLTIPRKKTGILDDVRCSSWLDAMKSSSPTAMKITKDINHGFASSDADSAYSTWLLKYPSALSSFEQIANHAKGKRIALFLDYDGTLSPIVDNPDCAFMSENMRAAVKKVAELFPTAIISGRSCDKVHEFVGLTELYYAGSHGMDIIGPVRQSVSDDHPNCIRSTDNQGKEVNLFQPAAEFLPMIDKVLDSLIECTKDIKGAKVENNKFCVSVHYRNVEEKNWKTVGQRVFDILKDYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLSNCDDVVPIYVGDDRTDEDAFKVLREGNKGYGILVASAPKESKAVYSLRDPSEVMEFLKTLVAWKSGHLNSFV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02141 387 Gene3D - 119 210 IPR023214 -
Accr1g02141 387 Gene3D - 219 385 IPR023214 -
Accr1g02141 387 NCBIfam HAD-IIB family hydrolase 121 339 IPR006379 -
Accr1g02141 387 Pfam Trehalose-phosphatase 122 366 IPR003337 GO:0003824|GO:0005992
Accr1g02141 387 SUPERFAMILY HAD-like 120 378 IPR036412 -
Accr1g02141 387 CDD HAD_TPP 120 370 - -
Accr1g02141 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 380 IPR044651 GO:0004805|GO:0005992
Accr1g02141 387 NCBIfam trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Accr1g02141 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02141 Accr-Chr1 55715801 55718486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02141 113 375 Trehalose Biosynthesis Gene Families AT1G70290 25.795 4.28e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02141 K01087 - gmx:100775207 663.299