Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02129 ATGGATCATCGTCGTCGACCTCTGTTAATATTATTCTTAAGTCTCTTTCTCTTAGCTTGTCTTCTTCCAACAGCCACATCAAGATCAAGAAGACCAAAACAGCCATTGGCTCAGAACATTCAATGGTGGTGCGATCGAACCCCACATCCAGAACCATGCAAATTCTACATGATGAGCCAAAACCACCAAGGCCACAGACTGAAACACAAGTCCAACTTCAGAGTCAAGCTAGTTCAGTTAGCTTTGAATCAAGCCCAACAAATGAAATATGAAGCTCGTGATTATACCCAAAACGGTGAAGCAGAGAAGCTTAAAGCTGTGTTTGGTGATTGCTTGAAGCTCTATGATAACACCATCTTCCATCTGAACCGAACCCTCGGAGGGCTCGGATCGAAACATGGCGACCGTGATAATCATCATCGTTGTTCCAATTTAGACGCTCAGACATGGTTGAGCACAGCTCTCACTAACATTCAGACATGCAAGAACGGAGCTAAGGACTTGAAGCTTAGTGTGCCACTGTTTACAGAGGCCAAAACTTTGTGTTACAATGTCACCAAGATGATAAGCAATAGTTTGGCGATAAGCGCAGCGTTTTTGACGAGGCCTGAGAGAGAAGAACTCATGATGAGTGAGAGTAATAAAAATAATGATGTTGATGAGGAGGATGGATATCCGAGGTGGTTTTCGAGGCAGGAGAGAAAGCTGGTGACGGTGTCGGCGTCGAAGATAAAGGCGAATGTGGTGGTGGCGAAGGACGGGTCGGGGCATTTCAAGACGGTGCAGGCGGCGATAGATGCGGCGGCGAAGAGGAAGTACAAGACGAGGTTTGTGATAAGAGTGAAGAAGGGGGTTTATAATGAGAACATAGAGGTTGATAAGACTAACAGTGGCATAATGCTGATTGGTGATGGTTTGAGATATACTGTGATTACAAGTTCCAAGAGCACTTCAGATGGCCTTACCACCTATAGCACCGCCACTGCTGGCATAGATGGGCCTAACTTCATTGCTCGTGATATATCGTTTGTTAACAGTGCTGGTCCTCTCAAAGGACAAGCAGTGGCACTTCGATCAGCCTCCGATCTCTCTGTCTTCTATCGATGTAGCATTATAGGTTATCAAGACACTGTCATGGCCCATGCACAACGTCAATTCTATAAACAGTGTTACATTTTTGGCACCGTAGATATCATCTTCGGCAATGCTGCCGTAGTTTTTCAAAATTGCGTAATCCTCGTAAGGAGACCACTATCAGGCCAGGCCAATATGATCACAGCCCAAGGTCGAGACGACCCGTTCCAAAACACAGGCACCTCACTACAAAATTGCATAATCAAAGCCGCACCAGACCTCAAGCCCGTCGTCAACTCCGTCACGACCTACTTGGGCCGGCCTTGGCAAGAATACTCTAGGGTTGTGGTAATGAAGTCCTACATAGATTCCTTAGTAAGCCCATTGGGCTGGTCTAAATGGGGAAATAGTGATTTTGCTCTTAGTACTCTGTATTTTGGGGAATATAAGAACTTTGGACCTGGTTCATCCACAAAAAATAGGGTAAATTGGAAAAGCTATCATGTGATAACTAGTGCAACTGAAGCATCTAGCTTCACCGTGAATGGTCTCATTGCTGGCAGTACCTGGTTGCCTTCAACTGGAGTTCCGTTTGCTTCTGGTTTATAG 1683 0.4545 MDHRRRPLLILFLSLFLLACLLPTATSRSRRPKQPLAQNIQWWCDRTPHPEPCKFYMMSQNHQGHRLKHKSNFRVKLVQLALNQAQQMKYEARDYTQNGEAEKLKAVFGDCLKLYDNTIFHLNRTLGGLGSKHGDRDNHHRCSNLDAQTWLSTALTNIQTCKNGAKDLKLSVPLFTEAKTLCYNVTKMISNSLAISAAFLTRPEREELMMSESNKNNDVDEEDGYPRWFSRQERKLVTVSASKIKANVVVAKDGSGHFKTVQAAIDAAAKRKYKTRFVIRVKKGVYNENIEVDKTNSGIMLIGDGLRYTVITSSKSTSDGLTTYSTATAGIDGPNFIARDISFVNSAGPLKGQAVALRSASDLSVFYRCSIIGYQDTVMAHAQRQFYKQCYIFGTVDIIFGNAAVVFQNCVILVRRPLSGQANMITAQGRDDPFQNTGTSLQNCIIKAAPDLKPVVNSVTTYLGRPWQEYSRVVVMKSYIDSLVSPLGWSKWGNSDFALSTLYFGEYKNFGPGSSTKNRVNWKSYHVITSATEASSFTVNGLIAGSTWLPSTGVPFASGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02129 560 CDD PMEI-like_3 42 201 - -
Accr1g02129 560 Pfam Pectinesterase 247 545 IPR000070 GO:0030599|GO:0042545
Accr1g02129 560 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Accr1g02129 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 199 IPR035513 -
Accr1g02129 560 PANTHER PECTINESTERASE 16 550 - -
Accr1g02129 560 SMART PMEI_2 35 195 IPR006501 GO:0004857
Accr1g02129 560 Gene3D - 240 560 IPR012334 -
Accr1g02129 560 Pfam Plant invertase/pectin methylesterase inhibitor 39 195 IPR006501 GO:0004857
Accr1g02129 560 NCBIfam pectinesterase inhibitor domain 9 196 IPR006501 GO:0004857
Accr1g02129 560 SUPERFAMILY Pectin lyase-like 243 559 IPR011050 -
Accr1g02129 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 199 IPR035513 -
Accr1g02129 560 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Accr1g02129 560 FunFam Pectinesterase 241 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02129 Accr-Chr1 55242575 55245353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02129 37 560 Carbohydrate Esterase AT5G51500 54.717 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02129 K01051 - gmx:100807908 676.011