Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02065 ATGTCTCAAGACAGTTCAGACCCTTCCTCGGCTTGCTGCTCAAGATCGGAGCATTTGGATTCAGCTTCAGCTGAGCTCAAGCTTTACCGAGCCTTCATTTTCTCTGTACCCATCTTCTTCACTTTCGTCCTGCTTTTACTGTTCTACGTTTTCTACCTTCGACCTCGTAGGGTTGATTGGTCGTCTCTTAGGATGAGAGCGTTTGCGGCTGCGGAGGATAATGGGGGTAACTCCAGGCCTGAATTGGGTTTGAAGAAAGAACTGAGAGAGATGCTGCCGATTATCGTATACAAAGAAAGCTTCTCAGTTAAAGATACACAATGCTCTGTTTGCCTTTTGGACTACCAACCAGAAGACAAGCTTCAACAGATACCTTTATGTGGCCATACATTTCACATGAGCTGCATCGATCTTTGGCTCACCAACCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTTCTAGCTTCTGCCAAATCTTCAATTGAGACATCTAATTTACAGAGACCATCTGGTGATGAAGAAACACCAACTACACAATTCTCTGAATCAAGATCAACAACACATCCAGATAATAGTGTTGCCCAGAGTTGCTCTAGAGATAATGCAAGCAGTGCCCAGTGCATTGATGTTGAAAGAGGAAATGCAGAAAGCAGTTAG 657 0.4521 MSQDSSDPSSACCSRSEHLDSASAELKLYRAFIFSVPIFFTFVLLLLFYVFYLRPRRVDWSSLRMRAFAAAEDNGGNSRPELGLKKELREMLPIIVYKESFSVKDTQCSVCLLDYQPEDKLQQIPLCGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSIETSNLQRPSGDEETPTTQFSESRSTTHPDNSVAQSCSRDNASSAQCIDVERGNAESS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02065 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 155 IPR013083 -
Accr1g02065 218 Pfam Ring finger domain 107 150 IPR001841 -
Accr1g02065 218 SMART ring_2 108 149 IPR001841 -
Accr1g02065 218 CDD RING-H2_EL5-like 107 150 - -
Accr1g02065 218 SUPERFAMILY RING/U-box 92 154 - -
Accr1g02065 218 PANTHER OS11G0150450 PROTEIN 47 199 - -
Accr1g02065 218 FunFam RING-H2 finger protein ATL7 74 155 - -
Accr1g02065 218 MobiDBLite consensus disorder prediction 162 218 - -
Accr1g02065 218 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02065 Accr-Chr1 53728073 53730819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02065 21 217 C3H Transcription Factor Family AT4G10150 51.961 8.32e-65 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02065 K19039 - qsa:O6P43_001690 269.24