Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02064 ATGATAATTGAGTCTATAGAAGGTCTGTTCGTTAATTTGGGAATCACTTTACATCTATGGGATTTCTCGGTTCTGGGAAGCTGGTTGGTAATGTCTCAAGACAGTTCAGACCCTTCCTCGGCTTGCTGCTCAAGATCGGAGCATTTGGATTCAGCTTCAGCTGAGCTCAAGCTTTACCGAGCCTTCATTTTCTCTGTACCCATCTTCTTCACTTTCGTCCTGCTTTTACTGTTCTACGTTTTCTACCTTCGACCTCGTAGGGTTGATTGGTCGTCTCTTAGGATGAGAGCGTTTGCGGCTGCGGAGGATAATGGGGGTAACTCCAGGCAGCCTGAATTGGGTTTGAAGAAAGAACTGAGAGAGATGCTGCCGATTATCGTATACAAAGAAAGCTTCTCAGTTAAAGATACACAATGCTCTGTTTGCCTTTTGGACTACCAACCAGAAGACAAGCTTCAACAGATACCTTTATGTGGCCATACATTTCACATGAGCTGCATCGATCTTTGGCTCACCAACCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTTCTAGCTTCTGCCAAATCTTCAATTGAGACATCTAATTTACAGAGACCATCTGGTGATGAAGAAACACCAACTACACAATTCTCTGAATCAAGATCAACAACACATCCAGATAATAGTGTTGCCCAGAGTTGCTCTAGAGATAATGCAAGCAGTGCCCAGTGCATTGATGTTGAAAGAGGAAATGCAGAAAGCAGTTAG 750 0.4453 MIIESIEGLFVNLGITLHLWDFSVLGSWLVMSQDSSDPSSACCSRSEHLDSASAELKLYRAFIFSVPIFFTFVLLLLFYVFYLRPRRVDWSSLRMRAFAAAEDNGGNSRQPELGLKKELREMLPIIVYKESFSVKDTQCSVCLLDYQPEDKLQQIPLCGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSIETSNLQRPSGDEETPTTQFSESRSTTHPDNSVAQSCSRDNASSAQCIDVERGNAESS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02064 249 CDD RING-H2_EL5-like 138 181 - -
Accr1g02064 249 Pfam Ring finger domain 138 181 IPR001841 -
Accr1g02064 249 PANTHER OS11G0150450 PROTEIN 73 230 - -
Accr1g02064 249 MobiDBLite consensus disorder prediction 193 249 - -
Accr1g02064 249 SMART ring_2 139 180 IPR001841 -
Accr1g02064 249 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
Accr1g02064 249 FunFam RING-H2 finger protein ATL7 105 186 - -
Accr1g02064 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 186 IPR013083 -
Accr1g02064 249 SUPERFAMILY RING/U-box 123 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02064 Accr-Chr1 53728073 53730909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02064 51 248 C3H Transcription Factor Family AT4G10150 51.707 2.35e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02064 K19039 - qsa:O6P43_001690 270.396