Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02017 ATGGCACAACTCATCAACCTCACATTGCTAACGATGCTCCTTTTGTCTCTCTTCTCCATTGAAGCTTTAGCTAAGCCATCCTTGGAAAGACCTCATCCTCGATACAATCCTCAAACCGTCGCTTATATAAAAGCCTCTTGTAAGTCCACTTTGTACCCAGATCTGTGCCTTCGCTACTTATATAAATTTGCCAATTCAGGTATTCAAGGCCCAGAACAATTGACTCATGTGGCCTTATCTGTAAGTCTCTCACGGACACTTCAAACAAGAGATTACTTGCAGCAAGTGGCCAAACAATTTGAGGCACTCAAGAATAGTAACAATCCTAGAGACTATTTTGTTCTCCAAGATTGCTTGAACCAGATCGGTGATAGTGTGGATGAGCTTGGCCATTCAATAAGAGAGCTTGAGAGGTTGAATAAGATCCCAAGCACTTCGATCAACGACGATGTGTTATGGCACATAAGCAACGTAGAGACGTGGGTGAGCACTGCGCTTACAGATGCGAGCACGTGTGTGGATTACTTTCCAGGTCATAGGATGAGTAAGATGAAGGCAGCCATAAGGGGTCAGGTCTTGAATGTTCAACAAATCACAAGCAATGCTCTTGCCTTGTTTCACAGATATGCAACTATGTACCGAGCGGCAGCCGCAACCAAGAAACCGTAA 669 0.4425 MAQLINLTLLTMLLLSLFSIEALAKPSLERPHPRYNPQTVAYIKASCKSTLYPDLCLRYLYKFANSGIQGPEQLTHVALSVSLSRTLQTRDYLQQVAKQFEALKNSNNPRDYFVLQDCLNQIGDSVDELGHSIRELERLNKIPSTSINDDVLWHISNVETWVSTALTDASTCVDYFPGHRMSKMKAAIRGQVLNVQQITSNALALFHRYATMYRAAAATKKP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02017 222 SMART PMEI_2 38 205 IPR006501 GO:0004857
Accr1g02017 222 CDD PMEI-like_3 45 211 - -
Accr1g02017 222 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 209 IPR035513 -
Accr1g02017 222 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 205 - -
Accr1g02017 222 FunFam Pectinesterase inhibitor 3 38 210 - -
Accr1g02017 222 NCBIfam pectinesterase inhibitor domain 7 209 IPR006501 GO:0004857
Accr1g02017 222 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 208 IPR035513 -
Accr1g02017 222 Pfam Plant invertase/pectin methylesterase inhibitor 42 205 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02017 Accr-Chr1 51265247 51265915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02017 36 206 Carbohydrate Esterase AT3G14310 29.714 2.83e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02017 - - pcin:129315147 307.76