Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01974 ATGGAACCTACGTCTGAAGATGGCAGCGGAGACGGTGGGCTTTCCCGGTTCCGTTCAACTCCGGCGACGTGGTTAGAAGCACTGCTCAAGGTGGAAGACGAAGAAGACCCATTGGGTACCCCTCAGTGCTTCACTCAGCTGCTTGCTACTGGTACCGATAGCTTGTCTAGAAATATGGGCTCGTTCGATTCGCCGGCGGCTGATGGAGGTGGCTTCGATGCTGGCTCATCGTCAGGTGGATTTTCCCGGCAGAATAGTTCTCCGGCGAACTTATTCGGGCATTCAATGGGTGCCTCTGAAACAGGTTTCTTCCCCAAGTACGGGGTTCAATACAATCATGACGTTAGCCCGCAAGATACCAATGTTTCTTCCATGGCTAATTTCAAACCAATCAGACAGAATGTCGAGCATACTGGCAAAACACCAGACATAGACATAGAGAAGATTTTGGAGTATTCAGTACCTTGTAGAGTTCGGGCAAAGCGTGGACATGCTACACATCCAAGGAGTATTGCTGAAAGGGTTCGTAGAACTCGGATAAGTGATCGCATACGGAAGCTTCAGGATCTTGTGCCAAACATGGATAAGCAAACAAATACTGCTGAAATGTTAGACGAGGCTGTAGCATATGTGAAGTCTCTGCAGAAGCAAATCGAGGGGAAAATTTCCAACTACTATTTTCTCCTTAGATCTTCATCTCCTTAA 705 0.478 MEPTSEDGSGDGGLSRFRSTPATWLEALLKVEDEEDPLGTPQCFTQLLATGTDSLSRNMGSFDSPAADGGGFDAGSSSGGFSRQNSSPANLFGHSMGASETGFFPKYGVQYNHDVSPQDTNVSSMANFKPIRQNVEHTGKTPDIDIEKILEYSVPCRVRAKRGHATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAEMLDEAVAYVKSLQKQIEGKISNYYFLLRSSSP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01974 234 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 71 221 - -
Accr1g01974 234 SMART finulus 170 220 IPR011598 GO:0046983
Accr1g01974 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 225 IPR036638 GO:0046983
Accr1g01974 234 Gene3D - 161 224 IPR036638 GO:0046983
Accr1g01974 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 214 IPR011598 GO:0046983
Accr1g01974 234 MobiDBLite consensus disorder prediction 59 88 - -
Accr1g01974 234 Pfam Helix-loop-helix DNA-binding domain 169 215 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01974 Accr-Chr1 50410829 50414815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01974 16 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 47.137 6.90e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g01974 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01974 - - pcin:129315765 353.599