Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01959 ATGGGACGTTCGCCTTGTTGCGAGAAAGCCCATACAAACAAAGGTGCTTGGACTAAAGACGAAGACCAACGCCTTATTGATTATATTCGCCTCCATGGCGAAGGCTCTTGGCGTTCTCTCCCTAAAGCTGCTGGATTGCTTAGATGTGGAAAGAGTTGCAGATTGAGATGGATTAACTACCTTCGTCCTGATCTCAAACGAGGAAATTTCACTCAAGAAGAAGACGACCTCATCATCAAGCTTCATAGTCTACTTGGAAACAAATGGTCTCTGATTGCGGCGCGATTACCTGGTAGAACCGACAATGAGATCAAGAATTACTGGAATACTCATATAAAGCGGAAGCTCATCGGCCGTGGGATCAATCCCCAAACGCACCGTTCTCTCAACGAAACCACCGCCTCTGTAAAATCCACCGCCGAGTGGGAATTCAAGACCTCTCCGGTGGCGCAAAACGACTTCCTCGTGAAGAAGCAGAAGCAGGAGAGTGATAATTTCAATTTCAATTGCATCGATTTCGGAAGCATCAAGGCGGTTGAGGAATTAAACAACACTATTAGTGGAACCACTTCAGAGGAAGTAGAACCGCCATTACTGGATCGAGATTCTTCGCTTCATGGTGGTGATGCTGGTGGTGAGCCTGATCTAGAGCTCTCGATTGGTCTCGTGCCATTTCACTCCGAGTCGGCTCGTACAGCGCAGGGGAACTTGGCCGAGTCGAAGATAGGATTGGTGCGGTCTCCGGCGACGATGGCTCAAACAGCGGCGTGTTGGAGTTGGCAATTCGATTTTCAGAGGTGGGGAAGTGTATAG 813 0.4871 MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLIGRGINPQTHRSLNETTASVKSTAEWEFKTSPVAQNDFLVKKQKQESDNFNFNCIDFGSIKAVEELNNTISGTTSEEVEPPLLDRDSSLHGGDAGGEPDLELSIGLVPFHSESARTAQGNLAESKIGLVRSPATMAQTAACWSWQFDFQRWGSV 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01959 270 MobiDBLite consensus disorder prediction 188 213 - -
Accr1g01959 270 CDD SANT 69 112 IPR001005 -
Accr1g01959 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr1g01959 270 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr1g01959 270 CDD SANT 16 61 IPR001005 -
Accr1g01959 270 FunFam Myb transcription factor 68 137 - -
Accr1g01959 270 Gene3D - 68 142 - -
Accr1g01959 270 SMART sant 13 63 IPR001005 -
Accr1g01959 270 SMART sant 66 114 IPR001005 -
Accr1g01959 270 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr1g01959 270 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr1g01959 270 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr1g01959 270 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 177 - -
Accr1g01959 270 Gene3D - 14 66 - -
Accr1g01959 270 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Accr1g01959 270 FunFam MYB-related transcription factor 13 66 - -
Accr1g01959 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01959 Accr-Chr1 50247017 50248053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01959 1 241 MYB Transcription Factor Family AT4G09460 58.197 2.07e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g01959 Myb_DNA-binding 9.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01959 K09422 - jre:109006329 325.094