Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01955 ATGATTTCCGTTGAATCGCAGCAAAAACCAGACCTCTCTGATCCTTCTCCAAAACCTGATTCAAATGAACCAAATTCTGCAAATTCCGCCCAGCCTACTCATATTTTCAAGTCTAAATTACCTGACATACCTATTTCCAACCATCTTCCTCTTCACACTTACTGCTTCGAGAATCTCGCCCAATGCGCTGATCGTCCCTGCCTCATCGTCGGCTCCACCGGCAAAATTTACTCCTACGCGGAAGCTCACCTGCAGTCGCGGAAGGTCGCCGCTGGATTCTCCAAGCTTGGGGTCAAGAAAGGTGATGTGATTATGATTTTGCTTCAGAATTCTCCTGAATTCGTTTTGTCGTTCTTTGCTGCTTCAATGATCGGCGCTGTGGCCACTGCGGCGAATCCCTTCTACACTGCCGACGAAATCTTCAAGCAGTTCCATGCCGCGAAGGCCAAACTGATCATCACGCAATCCGCGTACGTAGGAAAGCTACGGGATCACGAGGCCGGCAAGGACATCGGAGAGGATCAGCTTAAGGTGATCACCGTCGATGATCCGCCGGAGAAGTGCCTGCATTTCTCGGTGGTGTCCGAAGCCGATGAGAACGAGGTGCCGGAGGTGGAGATCGATCCGGACGATCCCGTGGCGCTGCCGTTTTCCTCCGGAACGACAGGGTTGCCGAAGGGCGTGATTCTGACTCACAAGAGCTTAGCAACGAGCGTGGCGCAACAGGTGGACGGCGAGAATCCGAACCTGTACCTGAAACCAGAGGACGTGTTGCTCTGTGTGCTTCCTCTGTTTCACATATTCTCTCTGAACAGTGTGTTGTTGTGTGCTCTGAGAGCGGGAAGTGCGGTGTTGCTGATGCATAAGTTTGAAATTGGCGCGTTGCTGGAACTGACGCAGAAGCATAAGGTGTCGGTGGCGATGGTGGTGCCGCCACTGGTGCTGGCGTTGGCGAAGAATCCGATGGTGGCGGACTACGACCTGAGCTCGATTCGATTGGTGTTGTCCGGGGCGGCGCCGCTGGGGAAGGAGCTGGAGGACGCTCTTAGAAGCAGAGTGCCCCAGGCCGTTTTGGGTCAGGGGTACGGAATGACGGAGGCAGGGCCAGTGTTGTCAATGTGCCTGGGATTTGCAAAAGAGGCATTCACAACAAAGTCAGGGTCATGTGGCACAGTAGTGAGAAACGCAGAGCTCAAAGTGCTTCACCCAGAAACTGGTCTCTCTCTTGGCTATAACCAGCCTGGTGAGATTTGCATCCGAGGCCACCAAATCATGAAAGGATATCTGAATAATGAGGAGGCGACGGCAACAACAATAGATGCAGAGGGGTGGTTGCACACTGGGGATATTGGCTACGTGGATGACGACGACGAGTTATTCATTGTGGACCGAGTTAAGGAGCTCATCAAATTCAAAGGCTTCCAGGTGCCACCAGCAGAACTTGAAGGCCTTCTCGTAAGTCACCCTTCCATTGCAGATGCAGCTGTCGTCCCGCAAAAGGACGAGGCTGCGGGTGAAGTTCCTGTTGCTTTTGTGGTGAGGTCAAATGGCTTTGATCTTACGGAAGAGGCTGTAAAGGAATACATTGCTAAACGGGTAGTGTTTTACAAAAGATTACACAGAGTGTACTTCGTTCATGCAATTCCAAAGTCTCCATCTGGCAAGATTTTGAGAAAAGATCTGAGAGCAAAGCTAGAGAGCAACAACAATATCCAAACGCCTTGA 1725 0.5165 MISVESQQKPDLSDPSPKPDSNEPNSANSAQPTHIFKSKLPDIPISNHLPLHTYCFENLAQCADRPCLIVGSTGKIYSYAEAHLQSRKVAAGFSKLGVKKGDVIMILLQNSPEFVLSFFAASMIGAVATAANPFYTADEIFKQFHAAKAKLIITQSAYVGKLRDHEAGKDIGEDQLKVITVDDPPEKCLHFSVVSEADENEVPEVEIDPDDPVALPFSSGTTGLPKGVILTHKSLATSVAQQVDGENPNLYLKPEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGALLELTQKHKVSVAMVVPPLVLALAKNPMVADYDLSSIRLVLSGAAPLGKELEDALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKEAFTTKSGSCGTVVRNAELKVLHPETGLSLGYNQPGEICIRGHQIMKGYLNNEEATATTIDAEGWLHTGDIGYVDDDDELFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDEAAGEVPVAFVVRSNGFDLTEEAVKEYIAKRVVFYKRLHRVYFVHAIPKSPSGKILRKDLRAKLESNNNIQTP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01955 574 Pfam AMP-binding enzyme 57 471 IPR000873 -
Accr1g01955 574 SUPERFAMILY Acetyl-CoA synthetase-like 45 567 - -
Accr1g01955 574 CDD 4CL 45 561 - -
Accr1g01955 574 FunFam 4-coumarate--CoA ligase 2 467 568 - -
Accr1g01955 574 Gene3D - 26 465 IPR042099 -
Accr1g01955 574 MobiDBLite consensus disorder prediction 1 32 - -
Accr1g01955 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 37 466 - -
Accr1g01955 574 Pfam AMP-binding enzyme C-terminal domain 480 555 IPR025110 -
Accr1g01955 574 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Accr1g01955 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 33 563 - -
Accr1g01955 574 Gene3D - 466 570 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01955 Accr-Chr1 50151639 50158095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01955 34 478 Monolignol Biosynthesis Gene Families AT1G65060 72.545 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01955 K01904 - gmx:547930 893.264