Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01944 ATGTACCCAAAACGGTCTAACCAAGGGGATGGAGCTGGTTCCAGGCCAGTCCGCTCTAGTGATAGGATTAAGACGAGGCCAAACATTTATGGTCGACCATACTTGTATTACAGCTCAAAGCACACCAGGAAAAGCAAGAACAAGACCAGGACAGCAGCTTCACAAATTGCCAAGATGTTGCGGCCAAGGGATCGACCGGCACAAGATTCAAATGCTTCTAATTCTGCAGCCACCAATCTTCGACGATCAACTAGGAAGAGAAGGATTTCTGTAAATCTTGAAGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTGATGAGGCCCACATATCAACAACCGAGAAAGCAGATTGACCAAAGGGTTAGTCATGATGAGTTGAGGTCTCGCAAACACAAAAAAGCAGTGGAAACTAAATCAAACCCTCGACGTGAAGGTCTGCGTCCTCGTCGTTCAAAGTCTGTTGTAAGAGAACCCTTAAATTCAGAATCTGATGATGAGCAAGGTTTTTCAGAAGAGAAAGATGGACAGGATGAAACAGAAAATGGGAATGATTTGGAGGAAAATGATGCAGATGATGGTCAGAATGAGATTGAAGGAGATGCTGAGGGTGAAGATGAAGGTGATGATGAGGATGAGGATGAAGGAGATGAAGACGGTGATGATGAAGATGGTGAAGAAGAGCAGGATGGAAGAAGACGCTATGATCTTCGAAATCGTGCAGATGTTCGCAGATTCTCGATGGAAGAAGGGAAGGCCCGACCAAGGTCACCCCGAAGAGTGTTACATCAAGGTATGGGCACTAAGGTTGGCAGGGATGTCAGGAAGGGTGGATCAAGAGTTCATAAGCGTTATCGTTTAGCTAGACCTGAAGATTCTGATGACTCCATTCTTGTGGATGAACTGGATCAAGGCCCTGCTATTCCATGGGGGCGAGGTGGCAGCAGGTCTGGCCCACCTTGGCTTTTTGGTGGATTAGACACGCATGGAACAACAGCATGGGGATTGAATCTTGCTGCATCAGGTTGGGGTCATCAAGGTGATGCTTTGGCCACATTGACTTCTGGAATTCAATCTGCTGGACCAAGCTCAAAAGGGGGTGCAGATATTCAACCATTACAGGTTGATGACAGTGTTAGTTTTGATGACATAGGTGGGCTCTCTGAATATATTGATGCTCTGAAGGAAATGGTTTTCTTTCCGTTACTGTATCCTGATTTCTTTGCAAGTTATCATATTACTCCTCCTAGAGGGGTGTTGTTATGTGGGCCCCCTGGCACAGGAAAAACACTAATTGCGAGAGCTTTAGCTTGTGCTGCATCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAGGGAGCAGATGTACTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAATTACTCTTTGAGGAAGCTCAAAAGAATCAACCTTCAATTATTTTCTTTGATGAAATAGATGGGCTTGCTCCTGTGAGGTCTAGCAAGCAAGAACAGATTCACAATTCTATTGTCTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATAGGGGCCACCAATAGGATTGATGCTATTGATGGGGCCTTGCGCCGCCCTGGTAGATTTGACCGTGAATTTAACTTTCCCTTGCCTGGTTGTGAGGCACGTACTGAAATATTAGACATTCATACCCGTAAGTGGAAGCATCCTCCTTCAAAGGAACTGAAAATGGAGCTTGCGGCTAGTTGTGTAGGATATTGTGGTGCTGACCTAAAGGCTCTATGTACTGAAGCTGCCATTCGTGCTTTTCGTGAAAAATATCCTCAGGTTTATATGAGTGATGACAAATTCTTAATAGATGTGGATTCTGTCATGGTAGAAAAGTATCACTTTGTTGAAGCAATGTCAACAATAACTCCTGCTGCTCATAGGGGTGCAATTGTACACTCTAGGCCGTTGTCTCTAGTTGTTCAACCATGCCTACAAAGACATCTAGAGGAGGCCATGAAAATTATATCTGATATTTTTCCTCCAGTTGCTGTTACATCAGAATTGTCCAAACTTTCTATGCTTTCCTATGGTTCTGCTATCCCACTTGTCTATAGACCTAGGCTTCTACTTTGTGGTGGTGAAGGTACCGGTCTGGATCATCTTGGGCCTGCAGTTTTACACGAACTGGAAAAATTTCCTGTTCATTCATTAGGACTTCCATCTCTCTTGTCGGATCCTAGTGCTAAGACGCCAGAGGAGGCTTTAGTACATATATTCGGTGAAGCTAGAAGAACAACCCCATCTATTCTCTATTTACCTCAATTCAACATTTGGTGGGAAACAGCACATGAACAACTTAGGGCCGTTCTCCTGACTTTGCTAGAAGAATTGCCTTCTGACATCCCTGTTTTATTACTTGGAACATCATCAGTGCCGCTTGTTGAAGTTGATGAAGTGCCTCCTTCATTGTTTCCTTCTCGATCTGTCTATAACATGAACTTACCATCTACTGAAGATAGAACATCATTTTTCAATTGTTTGATTGATGCTGCTTTATCAGTCTCATTGGAGAGAACAAGCAAAAAAGCCCAAGAAACAGATTCTCTTCCCGAACTTCCCAAGGCACCGAAATTGGCAGGTGGTATGAAGGTATCTGAGCTCAAAGCAACGGTTGAAGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTATACGACAAACGATTTATTGCCTTCCATTATCCGGTATCAGATGAAGATGCACCTAACTATCGCACAATAATTCAGAACCCGATGGACATTGCTACGATACTGCAGCATGTTGATAATGGTCTTTATATTACATGTTCAGCATTCTTACAGGACATTGACCTTATTGTTTCCAATGCTAAGGCTTATAATGGAGAGGACTACAATGGTTCAAGGATTGTCAGTAGAGCTTGTGAACTCCGTGATGCAGTGGATGGAATGCTCTCACAGATGGACCCAGCCCTGGTTGCATATTGTGACAAGATTGCTGCCCAGGGTGGCCCAGTTAATTTGCCTGATGAATTCGGCGGTTCTACTTTCCCATCTACTCCTGTTGTTCAGCTGGGAACCACCACTAGAATGAGTGCTCGGCTTCGTAATGTCCAACCTGAGGTTAATGTGGATCAAAGCTATGAAGCATTGAAGCGGACGAAAAGGGGCACTGATTTCACACATGCAGATGACAAGTCACGGCAAGATCCTCTGCCCCCAAAGACTTTACAAGAACAGCAAGCCAGTGAAGTGGCTTGTGAAGGGCCTGAACCTGCTTCAGTTGATGAAAATCCACATGGAGCTAGTACATGTGAACAAGCGGATGATAGTAGCAGCGTAGATGTCACAATGGTTGATGCTGAGTTTTCCAGCCAAGTGGAGTCTGTGAAGCAGCGTTTTGTGAAGCGTAGTGAAAACTACAACATTCCGCAGCTTGAAAGGATTTACACAAGAATCATGAAAGCTATTTTTGAAGCCGAAGGCAAAGGAACGAAACATCTCAAGACTTGGGTGTTGAAGTTTTTGTTTACATTTGTAGAAGATGACGCAAATTTCTAA 3612 0.441 MYPKRSNQGDGAGSRPVRSSDRIKTRPNIYGRPYLYYSSKHTRKSKNKTRTAASQIAKMLRPRDRPAQDSNASNSAATNLRRSTRKRRISVNLEGFTDSSGAEDEDLMRPTYQQPRKQIDQRVSHDELRSRKHKKAVETKSNPRREGLRPRRSKSVVREPLNSESDDEQGFSEEKDGQDETENGNDLEENDADDGQNEIEGDAEGEDEGDDEDEDEGDEDGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKARPRSPRRVLHQGMGTKVGRDVRKGGSRVHKRYRLARPEDSDDSILVDELDQGPAIPWGRGGSRSGPPWLFGGLDTHGTTAWGLNLAASGWGHQGDALATLTSGIQSAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARTEILDIHTRKWKHPPSKELKMELAASCVGYCGADLKALCTEAAIRAFREKYPQVYMSDDKFLIDVDSVMVEKYHFVEAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLEEAMKIISDIFPPVAVTSELSKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFNIWWETAHEQLRAVLLTLLEELPSDIPVLLLGTSSVPLVEVDEVPPSLFPSRSVYNMNLPSTEDRTSFFNCLIDAALSVSLERTSKKAQETDSLPELPKAPKLAGGMKVSELKATVEAEQHALRRLRMCLRDVCNRILYDKRFIAFHYPVSDEDAPNYRTIIQNPMDIATILQHVDNGLYITCSAFLQDIDLIVSNAKAYNGEDYNGSRIVSRACELRDAVDGMLSQMDPALVAYCDKIAAQGGPVNLPDEFGGSTFPSTPVVQLGTTTRMSARLRNVQPEVNVDQSYEALKRTKRGTDFTHADDKSRQDPLPPKTLQEQQASEVACEGPEPASVDENPHGASTCEQADDSSSVDVTMVDAEFSSQVESVKQRFVKRSENYNIPQLERIYTRIMKAIFEAEGKGTKHLKTWVLKFLFTFVEDDANF 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01944 1203 CDD Bromo_AAA 900 1010 - -
Accr1g01944 1203 PANTHER AAA DOMAIN-CONTAINING 40 1017 IPR045199 -
Accr1g01944 1203 Gene3D - 686 852 IPR027417 -
Accr1g01944 1203 SMART bromo_6 900 1007 IPR001487 GO:0005515
Accr1g01944 1203 MobiDBLite consensus disorder prediction 1065 1089 - -
Accr1g01944 1203 SUPERFAMILY Bromodomain 899 1011 IPR036427 GO:0005515
Accr1g01944 1203 Gene3D - 556 641 - -
Accr1g01944 1203 MobiDBLite consensus disorder prediction 119 165 - -
Accr1g01944 1203 Pfam AAA+ lid domain 583 619 IPR041569 -
Accr1g01944 1203 SMART AAA_5 416 557 IPR003593 GO:0016887
Accr1g01944 1203 ProSitePatterns AAA-protein family signature. 525 543 IPR003960 GO:0005524|GO:0016887
Accr1g01944 1203 ProSiteProfiles Bromodomain profile. 923 985 IPR001487 GO:0005515
Accr1g01944 1203 MobiDBLite consensus disorder prediction 1 239 - -
Accr1g01944 1203 Pfam Bromodomain 914 981 IPR001487 GO:0005515
Accr1g01944 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 639 IPR027417 -
Accr1g01944 1203 Gene3D - 378 648 IPR027417 -
Accr1g01944 1203 FunFam ATPase family AAA domain-containing protein 2B 556 641 - -
Accr1g01944 1203 MobiDBLite consensus disorder prediction 1063 1128 - -
Accr1g01944 1203 MobiDBLite consensus disorder prediction 166 227 - -
Accr1g01944 1203 Gene3D - 892 1020 IPR036427 GO:0005515
Accr1g01944 1203 PRINTS Bromodomain signature 932 948 IPR001487 GO:0005515
Accr1g01944 1203 PRINTS Bromodomain signature 966 985 IPR001487 GO:0005515
Accr1g01944 1203 PRINTS Bromodomain signature 948 966 IPR001487 GO:0005515
Accr1g01944 1203 FunFam ATPase family, AAA domain-containing 2 378 561 - -
Accr1g01944 1203 Pfam ATPase family associated with various cellular activities (AAA) 420 555 IPR003959 GO:0005524|GO:0016887
Accr1g01944 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 704 853 IPR027417 -
Accr1g01944 1203 FunFam ATPase family AAA domain-containing protein 892 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01944 Accr-Chr1 49979632 49986996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01944 366 614 Calmodulin-binding Proteins AT3G56690 37.154 4.47e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01944 K22531 - gmx:100787765 1884