Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr1g01938 | ATGCTTCATCAGCCCCATACTTCCCTCGCTCCTCGTAAAGTACTCTTATCGCTGCCTCAACCATCACTTGCCTCGTCCCTGTTTCCCAACCCTTCTGCTGTCAGTGGCAGCTCGACAGATTCTCCGGACGTGCCTTCAAATTGTCAGAATTTCATCGTCTATCAGGCTGTCGAAAATTCTCAAGGGACTTCCGACGTGCCCACAACCTTTTTTAATCCGTGGAGGGACGGTTCTGTGTGTCAAGTTGACCGAACGAAAATAAAAAACCCAGTGCGATGTGAGGTTTGCAAAATTGATTTTAATAGCAAGTGTGTGTTTGAGGAACACATATCAGGAAAGAAGCACAGGAAGAAAATGCAATTGCACAGTAATCCTAGCAACACAATTTTATCTGGAACCTCAAATGTGAAGAATGTTCAAGTCCAAGACTGTAGTGTCCAAGGACAAGAGCCATTTGTTGATGCAGGCAAGGATTTAAAGTTTAAGAAACGGAAGCTTTTGAGTGGGGGTGAAGCAGAGCATAATGATCAGGTTGACTTGACATCTAATAATGATGGGATTGGTTCGAAGAAAGTCAAGGTTACTCAATGTACACGATGTGAAATTTGCATGGTCAACTGTGATACTAAGGATATTTATATCACACACTTGTCTGGGAAGAAACACCTGAGAAACCTGAAAAAAGTATCTAAATTAGAAAGTGATGTCGCCGGTGCTGCTGCTGATGTCAGTGTAGCTTGTATCTCTGCAGCCATTGTAACAGAAAATGATAAGCAACCGGCATCGAATCCAGCAGCTATTGGGACACAAGAAAATCCAGGCACTAATGAACAAGAATGTATCAATTCATGTCAACCAGAAAATACAGTCATATTAGAAGCTCAAGAAAAGGACACTGAGACAAAGAAACAGTCTAAATCAAAAGGTGATGGTGCCGGCGCTGATGTCAGCATACCTGGCGTGACTGCAGCCATCGTAGCAGAAAATGATAAGCAACCAGCGAAAAATCCAGCTATTGAGTCACAAGAAAAGCCTGGCACTAATAAACAAGAATGTGTCAATTCATGTCAACCAGAAAATGCAGTCATATTAGAAGCTCCAGAAAAGGACACTGAATCAAAGAAACGGAGGCATGAACTTGATGGTGGGACTTCTAAAGCCTCTATCGAGCCTGGCACTCTATCTAATGCCAACAATGAGACAGTCTTTAATTTGCCTGATTACCCTGCTCAGTGTGAAATCTGCATGATTAATTGTAATAGCAAGCCTGTTTATATCAGACATATATCAGGGAAGAGACACAAGAGGAACATGGAGAAAGTATCAAAATCAAAAAATGACGGGGCTGGTGCTAGTGTAGCCGATGCTGTTTCGGCCATTATGCCAGCAATTGATGTGCAACAAGCAACGAATCAAGCAATTGAGCCACAAGAAAAGCTGGAGACTAGTGTACGAGAAGGGGTGGTTGCGCTTACATTGGGAAGTGTGGTCATGTTGGAGGCTTCAGAAAAGGATATGGAAACAAAGAGACGTAAAATTGAACCTTTTGATGGGGCTGCAACTACTTCTTTCAGAGTGTGCAAGCTATGCAATGCGCCATGCAACAGCGAGGCAGACTTTAATTCTCACCTCCAAGGGAAGAAACATGCTGCAATGGTTGACTTGACATCTAATGATGATGGGATTGGTTTGAAGAAAGTCAAGGTTACTCAATGTACACGATGTGAAATTTGCATGGTCAACTGTGATACTAAGGATATTTATATCACACACTTGTCTGGGAAGAAACACCTGAGAAACCTGAAAAAAGTATCTAAATTAGAAAGTGATGGCGCCGGTGCTGCTGCTGATGTCAGTGTAGCTTGTATCTCTGCAGCCATTGTAACAGAAAATGATAAGCAACCGGCATCGAATCCAGCAGCTATTGGGACACAAGAAAATCCAGGCACTAATGAACAAGAATGTATCAATTCTTGTCAACCAGAAAAGACAGTCATATTAGAAGCTCAAGAAAAGGACACTGAGACAAAGAAACAGTCTGAATCAAAAGGTGATGGTGCCGGCGCTGATGTCAGCATACCTGGCGTGACTGCAGCCATCGTAGCAGAAAATGATAAGCAACCAGTGACAAATCCAGCTATTGAGTCACAAGAAAAGCCAGGCACTAATGAACAAGAATGTATCAATTCATGTCAACCAGAAAATACAGTCATATTAGAAGCTCAAGAAAAGGACACTGAGACAAAGAAACAGTCTGAATCAAAAGATGATGGTGCCGGCGCTGATGTCAGCATACCTGGCGTGACTGCAGCCATCGTAGCAGAAAATGATAAGCAACCAGTGACAAATCCAGCTATTGAGTCACAAGAAAAGCCTGGCACTAATAAACAAGAATGTGTCAATTCATGTCAACCAGAAATTGCAGTCATATTAGAAGCTCCAGAAATGGACACTGAATCAAAGAAACGAAGGCATGAACTTGATGGTGGGACTTCTAAAGCCTCTATCGAGCCTGGCACTCTATCTAATGCCAACAATGAGACAGTCTTTAATTTGCCTGATTACCCTGCTCAGTGTGAAATCTGCATGATTAATTGTAATAGCAAGCCTGTTTATATCAGACATATATCAGGGAAGAGACACAAGAGGAACATGGAGAAAGTATCAAAATCAAAAAATGATGTGGCTGGTGCTAGTGTAGCCGATGCTGTTTCGGCCATTATGCCAGCAATTGATGCGCAACAAGCAACGAATCAAGCAATTGAGCCACAAGAAAAGCTGGAGACTAGTGTACGAGAAGGGGTGGTTGCGCTTACATTGGGAAGTGTGGTCATGTTGGAGGCTTCAGAAAAGGATATGGAAACAAAGAGACGTAAAATTGAACCTTTAGATGGGGCTGCAACTACTTCTTTCAGAGTGTGCAAGCTATGCAATGCGCCGTGCAACAGCGAGGTAGACTTTAATTCTCACCTCCAAGGGAAGAAACATGCTGCAATGGTGAAGAAGCTGGCAAATTCTAACAAGTAG | 3027 | 0.4265 | MLHQPHTSLAPRKVLLSLPQPSLASSLFPNPSAVSGSSTDSPDVPSNCQNFIVYQAVENSQGTSDVPTTFFNPWRDGSVCQVDRTKIKNPVRCEVCKIDFNSKCVFEEHISGKKHRKKMQLHSNPSNTILSGTSNVKNVQVQDCSVQGQEPFVDAGKDLKFKKRKLLSGGEAEHNDQVDLTSNNDGIGSKKVKVTQCTRCEICMVNCDTKDIYITHLSGKKHLRNLKKVSKLESDVAGAAADVSVACISAAIVTENDKQPASNPAAIGTQENPGTNEQECINSCQPENTVILEAQEKDTETKKQSKSKGDGAGADVSIPGVTAAIVAENDKQPAKNPAIESQEKPGTNKQECVNSCQPENAVILEAPEKDTESKKRRHELDGGTSKASIEPGTLSNANNETVFNLPDYPAQCEICMINCNSKPVYIRHISGKRHKRNMEKVSKSKNDGAGASVADAVSAIMPAIDVQQATNQAIEPQEKLETSVREGVVALTLGSVVMLEASEKDMETKRRKIEPFDGAATTSFRVCKLCNAPCNSEADFNSHLQGKKHAAMVDLTSNDDGIGLKKVKVTQCTRCEICMVNCDTKDIYITHLSGKKHLRNLKKVSKLESDGAGAAADVSVACISAAIVTENDKQPASNPAAIGTQENPGTNEQECINSCQPEKTVILEAQEKDTETKKQSESKGDGAGADVSIPGVTAAIVAENDKQPVTNPAIESQEKPGTNEQECINSCQPENTVILEAQEKDTETKKQSESKDDGAGADVSIPGVTAAIVAENDKQPVTNPAIESQEKPGTNKQECVNSCQPEIAVILEAPEMDTESKKRRHELDGGTSKASIEPGTLSNANNETVFNLPDYPAQCEICMINCNSKPVYIRHISGKRHKRNMEKVSKSKNDVAGASVADAVSAIMPAIDAQQATNQAIEPQEKLETSVREGVVALTLGSVVMLEASEKDMETKRRKIEPLDGAATTSFRVCKLCNAPCNSEVDFNSHLQGKKHAAMVKKLANSNK | 1008 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr1g01938 | 1008 | SUPERFAMILY | beta-beta-alpha zinc fingers | 848 | 887 | IPR036236 | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 707 | 727 | - | - | |
Accr1g01938 | 1008 | Gene3D | Classic Zinc Finger | 177 | 229 | - | - | |
Accr1g01938 | 1008 | Gene3D | Classic Zinc Finger | 559 | 604 | - | - | |
Accr1g01938 | 1008 | Gene3D | Classic Zinc Finger | 394 | 441 | - | - | |
Accr1g01938 | 1008 | Gene3D | Classic Zinc Finger | 841 | 888 | - | - | |
Accr1g01938 | 1008 | Gene3D | Classic Zinc Finger | 501 | 556 | - | - | |
Accr1g01938 | 1008 | Gene3D | Classic Zinc Finger | 78 | 123 | - | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 366 | 384 | - | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 817 | 831 | - | - | |
Accr1g01938 | 1008 | SUPERFAMILY | beta-beta-alpha zinc fingers | 970 | 1003 | IPR036236 | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 817 | 840 | - | - | |
Accr1g01938 | 1008 | SUPERFAMILY | beta-beta-alpha zinc fingers | 189 | 229 | IPR036236 | - | |
Accr1g01938 | 1008 | SMART | c2h2final6 | 525 | 549 | IPR013087 | - | |
Accr1g01938 | 1008 | SMART | c2h2final6 | 198 | 222 | IPR013087 | - | |
Accr1g01938 | 1008 | SMART | c2h2final6 | 91 | 115 | IPR013087 | - | |
Accr1g01938 | 1008 | SMART | c2h2final6 | 972 | 996 | IPR013087 | - | |
Accr1g01938 | 1008 | SMART | c2h2final6 | 857 | 881 | IPR013087 | - | |
Accr1g01938 | 1008 | SMART | c2h2final6 | 410 | 434 | IPR013087 | - | |
Accr1g01938 | 1008 | SMART | c2h2final6 | 573 | 597 | IPR013087 | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 709 | 727 | - | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 329 | 353 | - | - | |
Accr1g01938 | 1008 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 93 | 115 | IPR013087 | - | |
Accr1g01938 | 1008 | Gene3D | Classic Zinc Finger | 965 | 1007 | - | - | |
Accr1g01938 | 1008 | PANTHER | OS06G0651300 PROTEIN-RELATED | 799 | 1005 | - | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 297 | 316 | - | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 634 | 655 | - | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 366 | 393 | - | - | |
Accr1g01938 | 1008 | SUPERFAMILY | beta-beta-alpha zinc fingers | 401 | 440 | IPR036236 | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 672 | 691 | - | - | |
Accr1g01938 | 1008 | SUPERFAMILY | beta-beta-alpha zinc fingers | 523 | 555 | IPR036236 | - | |
Accr1g01938 | 1008 | Pfam | Zinc-finger of C2H2 type | 858 | 881 | - | - | |
Accr1g01938 | 1008 | Pfam | Zinc-finger of C2H2 type | 527 | 549 | - | - | |
Accr1g01938 | 1008 | Pfam | Zinc-finger of C2H2 type | 974 | 996 | - | - | |
Accr1g01938 | 1008 | Pfam | Zinc-finger of C2H2 type | 411 | 434 | - | - | |
Accr1g01938 | 1008 | Pfam | Zinc-finger of C2H2 type | 574 | 597 | - | - | |
Accr1g01938 | 1008 | Pfam | Zinc-finger of C2H2 type | 92 | 115 | - | - | |
Accr1g01938 | 1008 | Pfam | Zinc-finger of C2H2 type | 199 | 222 | - | - | |
Accr1g01938 | 1008 | MobiDBLite | consensus disorder prediction | 744 | 763 | - | - | |
Accr1g01938 | 1008 | SMART | ZnF_U1_5 | 407 | 441 | IPR003604 | GO:0003676|GO:0008270 | |
Accr1g01938 | 1008 | SMART | ZnF_U1_5 | 969 | 1003 | IPR003604 | GO:0003676|GO:0008270 | |
Accr1g01938 | 1008 | SMART | ZnF_U1_5 | 195 | 229 | IPR003604 | GO:0003676|GO:0008270 | |
Accr1g01938 | 1008 | SMART | ZnF_U1_5 | 88 | 122 | IPR003604 | GO:0003676|GO:0008270 | |
Accr1g01938 | 1008 | SMART | ZnF_U1_5 | 854 | 888 | IPR003604 | GO:0003676|GO:0008270 | |
Accr1g01938 | 1008 | SMART | ZnF_U1_5 | 522 | 556 | IPR003604 | GO:0003676|GO:0008270 | |
Accr1g01938 | 1008 | SMART | ZnF_U1_5 | 570 | 604 | IPR003604 | GO:0003676|GO:0008270 | |
Accr1g01938 | 1008 | SUPERFAMILY | beta-beta-alpha zinc fingers | 86 | 122 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr1g01938 | Accr-Chr1 | 49933962 | 49938728 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr1g01938 | 507 | 601 | C2H2 Transcription Factor Family | AT5G61190 | 27.723 | 1.08e-06 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr1g01938 | - | - | pcin:129315651 | 397.127 |