Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01921 ATGGGAGGTTTGAGTTGTATAGTGGGAAGTTGCCCGCACCATCGGTTCCTTGCATCTTTAATTTATGAGCGGTCGGTAAAAACGTTTTCTCCGCCATCGACCCTCCCTGGTTATACAGACAAAAGACTAAGTGGAAATGGCTACTTTACGAAATTCCGAATAAGTATCAGGCCTCTGTCTGCATTGCCCGATAATAACGATTCCGGGCATTCCAACTCAATCTTTACTAAGGAGGAGGACATTAATGAAGGAACACCAGCACAGACAGAATTAACAGGATGGAGGCTGCTCGCCGGGAATTCAGGAATAATATCGTCGTGCTTGGTTGGCCTTCTGACCGGCGTCGCTGTTGTGCTCTTCAATTATCTAGTCCATGAAATTCGTGATTTTTTATGGGACGGGATTCCCTATCGAGGGGCCTCGTGGTTGAGAGAAGAGCCTCTTCAGGAAAACTGGACTAGGATAATCGTAGTACCCGCTTTTGGGGGCTTGAATGTTGCCGTGTTGAGCCTACTTCTTCAACGCATTGCTTCTGCTGAGGAAGATCCATTGCGTCGCACATCTGCTTATCTCAAGTCTGCTTCCCAACCTATTATCAAGGCTATGCAAGCTTGTATCACTTTAGGCACGGGGAATTCCTTGGGTCCTGAGGGTCCCAGTGTTGATATCGGTACTTCCACTGCCAAAGGTGTTGGTTTTTTCCTCGACAAGAGTTCTAGCAGAATGTTATCTCTTTTGGCCGCTGGATCTGCTGCTGGAATTTCTTCTGGTTTCAATGCTGCTGTTGCTGGTTGTTTTTTCGCTGTCGAGTCTGTCTTATGGCCCTCACCTGTAGATGCATCTATGTCACTTACAAATTCTACATCCATGGTAATACTTAGTGCTGTCATAGCTTCAGTTGTTTCTCAGGTTGGTCTTGGTTCTGAACCTGCCTTCAAGGTTCCGGATTATGACTTTCGTTCAATTGGTGAGCTACCATTATATCTATTGCTGGGTATCTTTTGTGGCTTGGTGTCACTGGCCCTATCTTGGTGCACTTCATATATGATAGCAAATGTTGACTATCTTCACAACACCACCGGCATACCAAGAGCTGTATTTCCTGTATTGGGTGGTTTATCTGTTGGCCTAATAGCATTGGCATATCCTGAAATCCTTTACTGGGGCTTTGAGAATGTTGACATTTTGTTAGAATCTCAGCCATTTGTGAAGAGTCTTTCCGTTGACCTACTTCTTCAGCTAGTAGCCATTAAGATTGTTGCAACTTCTCTGTGTCGGGCTTCTGGATTAGTGGGAGGTTATTATGCCCCATCTCTCTTTATTGGTGCAGCTACCGGGATGGCGTATGGAAAATTCATTGGTTATATTGTTGCTGAGGTCAATCCTATAATTCATCTGTCTGTTTTGGAAGTGGCATCACCTCAAGCTTATGGCCTGGTTGGAATGGCAGCAACTCTCTCAGGAGTATGTCGGGTGCCTCTTACTTCTGTCTTGCTGCTGTTTGAACTGACCCAAGACTATCGGATTGTTCTACCGCTTCTTGGAGCTGTAGGCTTGTCTTCATGGATTTCATCTGTAGAGACAAAGAAAGGGAATGACCGTGGTGCAGTGGAGCGCAAACTTATAAGCTCAGATTCTATTATTCGTCCTGAAAATTCTCCCAATAGTTCAATTGAACCATCTGTAGAGACAAAGAAAGCCAATGATCATGGTACAGTGGATCGCAAACTTATAAACTCAGGTGAAAGTCTACTTTGTATAGAGGATGATATTGTGGCAACCACATATTTAAGAAGAAAGATATTAGTCTCACAAGCCATGAAGAGGAGATATGTGACAGCCTCAATGGGTACACGGCTTACAGAAGTAGTAAATCTCATGCTTGCTGAGAAACAGTCCTGTGCAGTGATTGTTGGTACTGATCATACTTTAATTGGCTTTTTGACGCTTAGAGACATTGGAGAGAACAGCAAATTTGCAAAAACTAGAAGCAAAAAACCCAAGGAGCTTGCAGTTTCAGAACTATGCCTTTTAGGAGGTGGAATATGTAGTGTTCCATGGACTGCTACTCCTGATATGGATCTTCTTTCTGCTCAAATGGCTATGAAGAAACATGGAGTCAATCACGTTCCAGTGGTTGAAAAGCTCGATGAAAGGGCATATCCTGTTGGCATATTAGACAGTGACAGTATCAGTTTGACTTGCAGTGCTTTGGCCACTAAAGAATCCCTCTCGTAA 2238 0.4401 MGGLSCIVGSCPHHRFLASLIYERSVKTFSPPSTLPGYTDKRLSGNGYFTKFRISIRPLSALPDNNDSGHSNSIFTKEEDINEGTPAQTELTGWRLLAGNSGIISSCLVGLLTGVAVVLFNYLVHEIRDFLWDGIPYRGASWLREEPLQENWTRIIVVPAFGGLNVAVLSLLLQRIASAEEDPLRRTSAYLKSASQPIIKAMQACITLGTGNSLGPEGPSVDIGTSTAKGVGFFLDKSSSRMLSLLAAGSAAGISSGFNAAVAGCFFAVESVLWPSPVDASMSLTNSTSMVILSAVIASVVSQVGLGSEPAFKVPDYDFRSIGELPLYLLLGIFCGLVSLALSWCTSYMIANVDYLHNTTGIPRAVFPVLGGLSVGLIALAYPEILYWGFENVDILLESQPFVKSLSVDLLLQLVAIKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFIGYIVAEVNPIIHLSVLEVASPQAYGLVGMAATLSGVCRVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWISSVETKKGNDRGAVERKLISSDSIIRPENSPNSSIEPSVETKKANDHGTVDRKLINSGESLLCIEDDIVATTYLRRKILVSQAMKRRYVTASMGTRLTEVVNLMLAEKQSCAVIVGTDHTLIGFLTLRDIGENSKFAKTRSKKPKELAVSELCLLGGGICSVPWTATPDMDLLSAQMAMKKHGVNHVPVVEKLDERAYPVGILDSDSISLTCSALATKESLS 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01921 745 SUPERFAMILY CBS-domain pair 598 727 IPR046342 -
Accr1g01921 745 Pfam Voltage gated chloride channel 191 524 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Accr1g01921 745 SUPERFAMILY Clc chloride channel 103 530 IPR014743 -
Accr1g01921 745 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 97 738 - -
Accr1g01921 745 SMART cbs_1 610 658 IPR000644 -
Accr1g01921 745 SMART cbs_1 685 736 IPR000644 -
Accr1g01921 745 PRINTS Chloride channel signature 430 450 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Accr1g01921 745 PRINTS Chloride channel signature 475 491 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Accr1g01921 745 PRINTS Chloride channel signature 251 270 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Accr1g01921 745 PRINTS Chloride channel signature 493 512 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Accr1g01921 745 PRINTS Chloride channel signature 200 219 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Accr1g01921 745 CDD Voltage_gated_ClC 110 521 - -
Accr1g01921 745 Gene3D Clc chloride channel 97 546 - -
Accr1g01921 745 CDD CBS_pair_voltage-gated_CLC_euk_bac 607 732 - -
Accr1g01921 745 ProSiteProfiles CBS domain profile. 607 663 IPR000644 -
Accr1g01921 745 Pfam CBS domain 603 653 IPR000644 -
Accr1g01921 745 Pfam CBS domain 688 727 IPR000644 -
Accr1g01921 745 Gene3D - 589 733 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01921 Accr-Chr1 49783066 49790266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01921 106 378 Ion Channels AT3G27170 24.671 9.89e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01921 K03281 - gmx:100812959 876.315