Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01918 ATGGAATATGGTGCGGCCTTAGTACACAACAATTCAGCGTTTGAGACCATATCAGACAGTACTAATACTGCTTCAGTTTCAGAAGTAGAAGGGGATTTCATTGACGAGCTCTTCGCACATGGTTGCTGGCTGGAAACCACTACTGGAGGATCATACAACCTCACAAATCCCCCTTCTCTAATCAACAGTGACCCTAATTTCCACAATTATTGGACACCCTCCTCATCAGACCCAAATCACCACCACCACCAAATCTATCACCAGCAAGATCAATCATCAGAGGTAAGTAGTAATAATTTCCCATTCTTATTCCAATCCGAAAGCTTTGCGGTTGCAAGCACCGAAGTCGCCAAAAGATGGTGGATCGGACCAAAGGCAAATCCTGGACCATCTTCCTCAGTCAAAGAAAGATTACTCCTTGCCGTGGGATACCTAAGAGAATACACCAAAAATACCAACATGTTTCTTCAGATATGGGTGCCCACTAGGAGATCATCCCTAGTTGATGATCCAAACGGCAATAAGAATCTTGAATATTACCGAAATGTTTCCAAGGGTTTTGATCATCATCATCATCAGTTGGCAGCTTCCGAGGAGGAATGTGCCGCTGAAGAGTTTCGAGTAGTCCTAGGAAAGTTGCCGGATCATCATCATTATCAGTGGAATACCCCCACTAGTGTTCGATTTTTCAAAAGTCATGAGTACGTTTCTTATGTAAATTATGCACCTCTGCACTATGATTTGCGTGGATCTTTGGCCCTTCCTGTGTTTGAGCGTGGCAGTGGGACTTCCCTTGGCGTTGTTGAGATTGTAATGACCAATCACAACATCGATTATCACCCACAGATTGACAATGTCTGCCACACTCTCCAGACTGTTGATTTTAACAAGAACGCTTGCCAGAACCTTATTTCTCCGGCTCTGAAGGTATTTGACGAGTTGTACCTAGCTGCACTAAATGAAATAGTAGAGGTATTAACATCTGTGTGCAAGACACACAATTTGCCTTTAGCTCTCACTTGGTCGCCCTGTGCCCAACAAAGCAAGGCCGGATTATGTCCCAACGACAACTTCGTAGGTTGTTTGTCCACCGTGGATTCCGCCTGCTACGTGGCGGATTTAGAGTTGCTGGGGTTCCAAGAAGCCTGCTCTGAGTACCACCTCCTTAGAGGCCAAGGCATTGTTGGCACCGCCTTTACCACCACCAAGCCATGCTTCGCCACCGACATAACCGCCTTCAGCAAAACCGAGTACCCTCTCTCTCAACACGCCGCTATGTTTGGCTTGCGCGCCGCCGTCGCTATCCCCCTCCGCAGTGTCTACACCGGAGCCGCGGCTGATTTCGTGCTGGAGTTTTTCTTACCCAAGAATTGCCATGACGGCGAAGAACAAAAGCAATTGCTGAATTTTTTGTGCATTGTTGTGCAACAAGCAGCTTGCCGGAGTTTCCATGTTGCCATGGACAACAAACAGATGGAGGAGGAAGAAGAGTTCACGTTTACAGTTGGAGATATGTTGGCTGCTGCGGCGGCTTCATCATCAAAAGGTGGTGGTGGTGGGGCCCATCACAAAGAAGAAACTCTAGAGTTTGGTGGGTCTAATTGTAATAATTTAGATGAAGCAGCGTCGTGTTCAAAGGAATCGTCGTGGATTGCTCATATGATGGAGGCTCAAACACAACACAAGGGTAAAGGCGTGTCGGTGGTGTCGTTGGAATACTTAGAAGAACCAAAACAAGAGTTTAAAGTGACAACCAACTGGCGATTCTGCAATAATAATAATAATAATGGCCAGACATTTTCAGATTATGGACAAGTTCATCCTGCGAATTCAGCAGCAGCAGCATCCAGAGCGATAAGTGTAGAGGGTGGAGGAGAATCTTATGCTTTTGGCGGTGGCAGCGGACGGCGATCGTCTTCCGGTGGCAGAAAATCAGGCGAGAAGAGACGAACCAAGGCCGAGAAGACTATCAGCTTGCCGGTTCTCCGGCAATACTTTGCAGGAAGCCTTAAAGATGCTGCCAAGAGCATCGGCGTGTGTCCGACAACTCTGAAAAGGATATGCAGACAACATGGGATTACAAGGTGGCCTTCGAGGAAAATAAAGAAGGTAGGACACTCGTTAAGGAAACTTCAGCTTGTGATCGATTCAGTACAAGGTGCTGATGGAGCCATTCAGATCGGTTCTTTCTACTCCAGTTTCCCAGAATTGAGCTCCACAAATTTGTCCTCTGCCACTGATCCTTCTCAATCATCAAACATCGGCGACCATGCTAAGAAACTACATAATAATAATCCTCATCGCTCGGAGCACGGCTTATATAGCCACCACCACGGAGGCGGCGCGACAACATTAAAATCTCCGCCCTCGTGTTGCAGCCAGACTTCCACCATCATCAACGCCGCCGTGTCTAGTGGAGGTGGGGATGTTTTAATGGCAGAAAACCCAGAAGCGTCGCTCCAGCTGAGAGCTCTTGAGCAGAAATTATCATCACTTGGTGAGCATCCTAGTACTGTTGAGGTTTTACCTCCGCCGCCGTTGCCAGAAAACAGTGGTGGGTGGAACAATGCACGAGATGGTGGTGCATTTAGGGTGAAAGCTACATTTGGGGATGAGAAGATTCGTTTTAGCTTGCAACCAAATTGGGGTTTTAGAGAACTAAAAATGGAGATAGCAAGAAGATTCAATGTAGATGATTTGAGCAACATTGGTGTGAAGTATTTAGATGAGGAAGGTGAGTGGGTTCTTTTAACATGTGATGCTGATCTTGAGGAATCTAAAGACACATATCGATCGTCAAAGATCCGTACAATGAGGTTCGCTTTGTTTCAAGCTTCGCCTCTAAATCTAGCCACCAACACTTTAGGCAGCAACAGCTCGTCATGA 2886 0.466 MEYGAALVHNNSAFETISDSTNTASVSEVEGDFIDELFAHGCWLETTTGGSYNLTNPPSLINSDPNFHNYWTPSSSDPNHHHHQIYHQQDQSSEVSSNNFPFLFQSESFAVASTEVAKRWWIGPKANPGPSSSVKERLLLAVGYLREYTKNTNMFLQIWVPTRRSSLVDDPNGNKNLEYYRNVSKGFDHHHHQLAASEEECAAEEFRVVLGKLPDHHHYQWNTPTSVRFFKSHEYVSYVNYAPLHYDLRGSLALPVFERGSGTSLGVVEIVMTNHNIDYHPQIDNVCHTLQTVDFNKNACQNLISPALKVFDELYLAALNEIVEVLTSVCKTHNLPLALTWSPCAQQSKAGLCPNDNFVGCLSTVDSACYVADLELLGFQEACSEYHLLRGQGIVGTAFTTTKPCFATDITAFSKTEYPLSQHAAMFGLRAAVAIPLRSVYTGAAADFVLEFFLPKNCHDGEEQKQLLNFLCIVVQQAACRSFHVAMDNKQMEEEEEFTFTVGDMLAAAAASSSKGGGGGAHHKEETLEFGGSNCNNLDEAASCSKESSWIAHMMEAQTQHKGKGVSVVSLEYLEEPKQEFKVTTNWRFCNNNNNNGQTFSDYGQVHPANSAAAASRAISVEGGGESYAFGGGSGRRSSSGGRKSGEKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGADGAIQIGSFYSSFPELSSTNLSSATDPSQSSNIGDHAKKLHNNNPHRSEHGLYSHHHGGGATTLKSPPSCCSQTSTIINAAVSSGGGDVLMAENPEASLQLRALEQKLSSLGEHPSTVEVLPPPPLPENSGGWNNARDGGAFRVKATFGDEKIRFSLQPNWGFRELKMEIARRFNVDDLSNIGVKYLDEEGEWVLLTCDADLEESKDTYRSSKIRTMRFALFQASPLNLATNTLGSNSSS 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01918 961 Gene3D - 377 444 IPR029016 -
Accr1g01918 961 Pfam PB1 domain 863 944 IPR000270 GO:0005515
Accr1g01918 961 ProSiteProfiles RWP-RK domain profile. 643 724 IPR003035 -
Accr1g01918 961 MobiDBLite consensus disorder prediction 760 775 - -
Accr1g01918 961 Gene3D - 861 947 - -
Accr1g01918 961 SMART PB1_new 862 945 IPR000270 GO:0005515
Accr1g01918 961 MobiDBLite consensus disorder prediction 741 759 - -
Accr1g01918 961 ProSiteProfiles PB1 domain profile. 862 940 IPR000270 GO:0005515
Accr1g01918 961 Pfam RWP-RK domain 657 704 IPR003035 -
Accr1g01918 961 CDD PB1_NLP 863 944 IPR034891 -
Accr1g01918 961 MobiDBLite consensus disorder prediction 630 654 - -
Accr1g01918 961 MobiDBLite consensus disorder prediction 741 790 - -
Accr1g01918 961 SUPERFAMILY CAD & PB1 domains 859 943 - -
Accr1g01918 961 PANTHER PROTEIN NLP8 72 958 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01918 Accr-Chr1 49687030 49691163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01918 11 951 NLP Transcription Factor Family AT4G35270 42.006 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Accr1g01918 PB1 1.4e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01918 - - pcin:129292760 1294.64