Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01916 ATGGGCGGCTCAAAGGAAAACCAAAACCATCTGGGTTCGTTGATGCCTTCATCAAATCTTCAAGGCGGTTCAAGAATGGAGAGCGTCAAGCTTATGAAGGAGATGACACAGAATAGTCGTCGGGCTCTGAGCAATATCAATCAGAATATTATGGAGGCTACTCAGAAGCCTTGTGTGGTCAACAGAACAGATCCATTCGGAAGATATACAGCACAGACAGTTCAGCACTGCCCTGAACAAACTAAAAAACTGAGCCTTTTGGCTCCGAACCCCAGTTACCATATGAACTGTACAATAACGGATATTGAAGAATACGAGGATGTTGGAGACAATGGAGTTCCAGAGTTTGTGAAGCACACAGAAGCAATGCTAGACGAAATTGACAGATTAGAGGAAGTGGAAATGGAAGACGTGGAGGAGCCTGTTATGGACATAGACGTCTGTGATGCGAAAGATCCACTGGCCGTTGTTGAATACATAGATGAGATCTACGAATTTTATAGGAAAATTGAGAATACCAGCTGTGTCTCTCCAGATTACATGGCTGGCCAGTTCGACGTCAATGAGAAGATGAGGGCTATCCTCATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTATGGAGGAAACGTTGTACCTTGCCCTCAATCTTATAGACAGGTTCTTGGAGCGGCAGGCAGTGATCAGAAAGAAGCTTCAGTTGGTGGGTGTAACGGCCATGTTAATAGCTTGCAAATATGAGGAGGTTTCTGTCCCAACTGTTGAAGATTTTATCTTGATAACAGACAAGGCATACAAAAGGGAAGAAGTTCTAAATATGGAGAAATTAGTGATGAACACGTTACAATTCAACCTCTGTGTGCCTACTCCATATGTGTTCATGAGGAGGTTTCTTAAAGCAGCTCAATCTGACAAAAAGCTGGAACTCTTGTCGTTCTTCATAATCGAGCTTTGCTTGGTGGAATACAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCTGCCATTTACACAGCTCAGTGTAGTCTGTACCAGTTTAAGCAGTGGACAAAGACCAGTGAATGGTATACTAACTACTCGGAAGACCAGCTTCTAGAGTGCTCAAGAATGATGGTTACTTTCCATCAGAAGGCAGGCACTGGAAAACTCACAGGAGTGTTTAGGAAGTACAGTACGTGGAAGTATGGTTATGCCGCAAATATGAAACCAGCCCTTTTTTTGCTGGACTCGGATTGA 1245 0.4329 MGGSKENQNHLGSLMPSSNLQGGSRMESVKLMKEMTQNSRRALSNINQNIMEATQKPCVVNRTDPFGRYTAQTVQHCPEQTKKLSLLAPNPSYHMNCTITDIEEYEDVGDNGVPEFVKHTEAMLDEIDRLEEVEMEDVEEPVMDIDVCDAKDPLAVVEYIDEIYEFYRKIENTSCVSPDYMAGQFDVNEKMRAILIDWLIEVHYKFELMEETLYLALNLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYKREEVLNMEKLVMNTLQFNLCVPTPYVFMRRFLKAAQSDKKLELLSFFIIELCLVEYKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTNYSEDQLLECSRMMVTFHQKAGTGKLTGVFRKYSTWKYGYAANMKPALFLLDSD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01916 414 Gene3D - 162 402 - -
Accr1g01916 414 CDD CYCLIN_AtCycB-like_rpt2 290 406 - -
Accr1g01916 414 Gene3D - 176 288 - -
Accr1g01916 414 Pfam Cyclin, N-terminal domain 162 288 IPR006671 -
Accr1g01916 414 PIRSF Cyclin_A_B_D_E 4 414 IPR046965 GO:0016538|GO:0044772
Accr1g01916 414 SUPERFAMILY Cyclin-like 289 405 IPR036915 -
Accr1g01916 414 SUPERFAMILY Cyclin-like 151 288 IPR036915 -
Accr1g01916 414 ProSitePatterns Cyclins signature. 192 223 IPR006671 -
Accr1g01916 414 Pfam Cyclin, C-terminal domain 290 405 IPR004367 -
Accr1g01916 414 FunFam G2/mitotic-specific cyclin-1 277 402 - -
Accr1g01916 414 MobiDBLite consensus disorder prediction 1 23 - -
Accr1g01916 414 PANTHER CYCLINS 119 386 IPR039361 -
Accr1g01916 414 CDD CYCLIN_AtCycB-like_rpt1 143 285 - -
Accr1g01916 414 SMART Cyclin_C_2 290 407 IPR004367 -
Accr1g01916 414 SMART cyclin_7 294 376 IPR013763 -
Accr1g01916 414 SMART cyclin_7 197 281 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01916 Accr-Chr1 49636925 49639359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01916 5 411 Core Cell Cycle Gene Families AT1G20610 57.176 9.38e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01916 K21777 - qsa:O6P43_011387 577.4