Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01915 ATGGGCGGCTCAAAGGAAAACCAAAACCATCTGGGTTCGTTGATGCCTTCATCAAATCTTCAAGGCGGTTCAAGAATGGAGAGCGTCAAGCTTATGAAGGAGATGACACAGAATAGTCGTCGGGCTCTGAGCAATATCAATCAGAATATTATGGAGGCTACTCAGAAGCCTTGTGTGGTCAACAGAACAGATCCATTCGGATATACAGCACAGACAGTTCAGCACTGCCCTGAACAAACTAAAAAACTGAGCCTTTTGGCTCCGAACCCCAGTTACCATATGAACTGTACAATAACGGATATTGAAGAATACGAGGATGTTGGAGACAATGGAGTTCCAGAGTTTGTGAAGCACACAGAAGCAATGCTAGACGAAATTGACAGATTAGAGGAAGTGGAAATGGAAGACGTGGAGGAGCCTGTTATGGACATAGACGTCTGTGATGCGAAAGATCCACTGGCCGTTGTTGAATACATAGATGAGATCTACGAATTTTATAGGAAAATTGAGAATACCAGCTGTGTCTCTCCAGATTACATGGCTGGCCAGTTCGACGTCAATGAGAAGATGAGGGCTATCCTCATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTATGGAGGAAACGTTGTACCTTGCCCTCAATCTTATAGACAGGTTCTTGGAGCGGCAGGCAGTGATCAGAAAGAAGCTTCAGTTGGTGGGTGTAACGGCCATGTTAATAGCTTGCAAATATGAGGAGGTTTCTGTCCCAACTGTTGAAGATTTTATCTTGATAACAGACAAGGCATACAAAAGGGAAGAAGTTCTAAATATGGAGAAATTAGTGATGAACACGTTACAATTCAACCTCTGTGTGCCTACTCCATATGTGTTCATGAGGAGGTTTCTTAAAGCAGCTCAATCTGACAAAAAGCTGGAACTCTTGTCGTTCTTCATAATCGAGCTTTGCTTGGTGGAATACAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCTGCCATTTACACAGCTCAGTGTAGTCTGTACCAGTTTAAGCAGTGGACAAAGACCAGTGAATGGTATACTAACTACTCGGAAGACCAGCTTCTAGAGTGCTCAAGAATGATGGTTACTTTCCATCAGAAGGCAGGCACTGGAAAACTCACAGGAGTGTTTAGGAAGTACAGTACGTGGAAGTATGGTTATGCCGCAAATATGAAACCAGCCCTTTTTTTGCTGGACTCGGATTGA 1242 0.4332 MGGSKENQNHLGSLMPSSNLQGGSRMESVKLMKEMTQNSRRALSNINQNIMEATQKPCVVNRTDPFGYTAQTVQHCPEQTKKLSLLAPNPSYHMNCTITDIEEYEDVGDNGVPEFVKHTEAMLDEIDRLEEVEMEDVEEPVMDIDVCDAKDPLAVVEYIDEIYEFYRKIENTSCVSPDYMAGQFDVNEKMRAILIDWLIEVHYKFELMEETLYLALNLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYKREEVLNMEKLVMNTLQFNLCVPTPYVFMRRFLKAAQSDKKLELLSFFIIELCLVEYKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTNYSEDQLLECSRMMVTFHQKAGTGKLTGVFRKYSTWKYGYAANMKPALFLLDSD 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01915 413 Gene3D - 161 401 - -
Accr1g01915 413 PIRSF Cyclin_A_B_D_E 4 413 IPR046965 GO:0016538|GO:0044772
Accr1g01915 413 CDD CYCLIN_AtCycB-like_rpt1 142 284 - -
Accr1g01915 413 Gene3D - 175 287 - -
Accr1g01915 413 PANTHER CYCLINS 118 385 IPR039361 -
Accr1g01915 413 SUPERFAMILY Cyclin-like 288 404 IPR036915 -
Accr1g01915 413 SMART Cyclin_C_2 289 406 IPR004367 -
Accr1g01915 413 Pfam Cyclin, C-terminal domain 289 404 IPR004367 -
Accr1g01915 413 SMART cyclin_7 196 280 IPR013763 -
Accr1g01915 413 SMART cyclin_7 293 375 IPR013763 -
Accr1g01915 413 Pfam Cyclin, N-terminal domain 161 287 IPR006671 -
Accr1g01915 413 SUPERFAMILY Cyclin-like 150 287 IPR036915 -
Accr1g01915 413 MobiDBLite consensus disorder prediction 1 23 - -
Accr1g01915 413 FunFam G2/mitotic-specific cyclin-1 276 401 - -
Accr1g01915 413 ProSitePatterns Cyclins signature. 191 222 IPR006671 -
Accr1g01915 413 CDD CYCLIN_AtCycB-like_rpt2 289 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01915 Accr-Chr1 49636925 49639359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01915 5 410 Core Cell Cycle Gene Families AT1G20610 56.944 8.38e-166 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01915 K21777 - qsa:O6P43_011387 576.244