Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01906 ATGGGAGACGTACAAGTACAACTGCCAGGCTTCAGATTTCACCCCACCGAAGAAGAACTCCTTGATTTCTACCTTAAGAACATGATCACCGGCAACAAGCTCTGCCTTGATGTCATCCACTTCCTCAATATCTACCTTCACGATCCCTGGGATTTGCCCGCCATGGCCAACGTCGGCGAGCGAGAATGGTACTTCTTCGTCCCACGTGACAAGAAACACGGCAGTGGCGGCAGGCCCAACCGCACTACCCAGAAAGGCTTCTGGAAAGCCACCGGCTCCGACCGCAAGATCCACAGCCTCTCCCACCCTAAGCGCCTCATCGGCCTCCGCAAGACCCTCGTCTTCTACCAGGGCAGAGCTCCCCGTGGCTGCAAGACCGATTGGGTCATGAATGAGTACCGCCTCCCCGACACTTCCCACTTCCCCAACAAGGATGCCATAGTGTTGTGCAAGATATACAGGAAGGCTACTCCGTTGAAAGTGCTGGAGCAGAGGGCGTCGCTATGCGAGTCTTCCTCCTCGTCCATGCCCACTACCTTCGAACCCAAGACGGAGCAAGTGGAAGAGACGGTGGAAATGGCGGCGGTGGCTAAGGTCAACCTGCCGGAGCTGCAATTACCCATGAACACGGGGTGGAGCCAAGACCTCTTTTGGCCTCAGTTAAACAGCCCTTGGCTCCAGTGTTTCACTCCCCTCACCATTTCCAACATCTTAAGTGCATCTTTGGATTAA 732 0.5505 MGDVQVQLPGFRFHPTEEELLDFYLKNMITGNKLCLDVIHFLNIYLHDPWDLPAMANVGEREWYFFVPRDKKHGSGGRPNRTTQKGFWKATGSDRKIHSLSHPKRLIGLRKTLVFYQGRAPRGCKTDWVMNEYRLPDTSHFPNKDAIVLCKIYRKATPLKVLEQRASLCESSSSSMPTTFEPKTEQVEETVEMAAVAKVNLPELQLPMNTGWSQDLFWPQLNSPWLQCFTPLTISNILSASLD 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01906 243 FunFam NAC domain-containing protein 67-like 16 159 - -
Accr1g01906 243 SUPERFAMILY NAC domain 6 155 IPR036093 GO:0003677|GO:0006355
Accr1g01906 243 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 183 - -
Accr1g01906 243 Gene3D NAC domain 16 158 IPR036093 GO:0003677|GO:0006355
Accr1g01906 243 ProSiteProfiles NAC domain profile. 7 155 IPR003441 GO:0003677|GO:0006355
Accr1g01906 243 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01906 Accr-Chr1 49538420 49539272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01906 6 233 NAC Transcription Factor Family AT2G17040 54.545 7.82e-93 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr1g01906 NAM 5.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01906 - - pcin:129293873 382.874