Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01904 ATGATGAGCTTGAAGCAGAGGATCATTGAGATGGCAAGGAAGTGGCAGAAAAAAACTGCTAGTGGCAGAATTATTTCGTATCCAACTATTGGAAGAGACTCATCATCATGGGCAACAAATAAAGGGCACTTCGTAGTTTATAGTATGGATCACAAGCGATTTGTGGTTCCAATAGAATATCTAAGCAAGAATGTGGTGAAGGAACTTCTGAGATGGTCAGAGGAAGAGTTTGGACTCGCAAGAAATGGACCAATTACGTTACCAATCGATGGTACCATGTTGGAGTACGTAATCTTGTTAGTTGCAGAACATGTGCCTGAAGATGTAGAGAAGGCTTTTATCTCTATCTCTTCCATCTCATTATGCTCTTCTCATCATCTTCACCCAACACAACAACCTATTATTATCTATGGTTTTTTATTCTCAAACCCTAGCTACTTCGATCCTCCATGTATTTTGATCGACTTTTGCATAATCGCTTAA 483 0.3934 MMSLKQRIIEMARKWQKKTASGRIISYPTIGRDSSSWATNKGHFVVYSMDHKRFVVPIEYLSKNVVKELLRWSEEEFGLARNGPITLPIDGTMLEYVILLVAEHVPEDVEKAFISISSISLCSSHHLHPTQQPIIIYGFLFSNPSYFDPPCILIDFCIIA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01904 160 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 126 IPR003676 GO:0009733
Accr1g01904 160 Pfam Auxin responsive protein 11 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01904 Accr-Chr1 49514922 49515404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01904 7 101 Calmodulin-binding Proteins AT4G34750 31.250 1.50e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01904 - - ccaj:109798531 141.739