Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01896 ATGGTGACCGGTCAGGCTGACCAGGACACTCCCGGTACAGTGCCTGCTACGTCTTCAATGCCTCAGGGTCGGCAACAGAGTCAGAAGCTCCGAGTTTACCACGAGGTTCTTCGTCGCCTCAAGAATTCCAACCACGACGAGGCTATGCAGCCTGACTTCGACCATCAACTTTGGGGTCACTTCAACCGCCTCCCAACACGATATGCGTTGGATGTTAATGTTGAAAGGGCGGCGGATGTTCTCACGCATAAGAGATTACTGCATTTGGCCCGTGACCCTGCTAATAGGCCTGCAATTGAAGTTCGCCAAGTCCAGATTTATCCCATATCTGATGGGAATTCATCTGACTCCGTCCATTCAGATGTACCTAGGGAAGAAGCTTGTCAAACCTCTCCAAAGAACTCAAGGAGACTGAGTATCCATCCTCCTCCTGCTTTTGGTTCTTCCCCTAATCTTGAAGCCTTGGCACTTGAAGCTAATTCTGAAGACGAGGAACACACTGCGCATGGGAGTGCTAAATATTCTCAGCCCATGCATGAAATCACCTTTTCTACAGATGACAAGCCAAAGCTTCTCAGTCAGTTAACTTCTTTGCTTGCTGAAATTGGTTTAAACATTAGAGAGGCACATGTCTTTTCCACTACTGATGGCTACTCATTAGATGTGTTTGTTGTTGACGGATGGCCAAACGAGGAAACACAGCAGCTTAAAGCAGCTTTGGAGAAAGAAGTATTGTTGATTGAGAGGCATGCACTTGGTACTCACCAATCAGAATTTTATGCTGGTAATACTGATCAAGAGGAGATGAAAAGTGAAGAAGGTCATTTGGTGATACCCAATGATGGTTCAGATGTTTGGGAAATAGAGCCTAAACATTTGAAGTATGGAAATAAAGTTGCATCTGGATCATTTGGTGAATTGTTTAGAGGCACATATTGTAGTCAGGACGTGGCCATTAAAGTTCTCAAGGCTGAGGATGTAAGTTTAGATTGGAAGAAAGAGTTTTCCCAGGAAGTCTATATTATGAGAAAGGTTAGGCACAAGAATGTTGTGCAATTTATTGGAGCATGTACCAAGCCACCACACTTTTGCATAGTAACAGAATTTATGAGTGGTGGAAGTGTGTATGACTTTTTGCATAAACAGAAGGGTGTGTTTAAATTTCCATCCCTACTCCGAGTAGCAATTGATGTTTCCAAGGGAATGAATTACTTGCACCAAAATAATATTATCCATAGAGATTTGAAGGCTGCTAATCTTTTGATGGATGAAAATCACGTTGTCAAGGTTGCTGATTTTGGTGTTGCTAGAGTGAAAGATCAATCCGGAGTCATGACAGCAGAAACTGGTACATACCGATGGATGGCACCAGAGGTTATAGAACACAAACGATATGATCAAAAGGCTGACGTGTTTAGTTTTGGAGTTGTTTTATGGGAATTGCTCACAGGAAAGCTTCCATATGAATATCTGACCCCACTACAGGCAGCAATAGGAGTGGTCCAGAAGGGCCTACGACCCACGATCCCTAGGAACACACATCCAAAAGTTGTTGAGCTTCTTGAGAGGTGTTGGCAGCAAGATCCAACATTAAGACCTGATTTCTGTGAAATTATTGAGATCCTGCAGCAATTAGCTAACGAGGTTGGGAATGAAGGAGAGGAGAAGCGAAGGGATAAATCTGGAGGATTTTTTTCTGCCCTTAGACGAGGTCATCTCTGA 1722 0.4367 MVTGQADQDTPGTVPATSSMPQGRQQSQKLRVYHEVLRRLKNSNHDEAMQPDFDHQLWGHFNRLPTRYALDVNVERAADVLTHKRLLHLARDPANRPAIEVRQVQIYPISDGNSSDSVHSDVPREEACQTSPKNSRRLSIHPPPAFGSSPNLEALALEANSEDEEHTAHGSAKYSQPMHEITFSTDDKPKLLSQLTSLLAEIGLNIREAHVFSTTDGYSLDVFVVDGWPNEETQQLKAALEKEVLLIERHALGTHQSEFYAGNTDQEEMKSEEGHLVIPNDGSDVWEIEPKHLKYGNKVASGSFGELFRGTYCSQDVAIKVLKAEDVSLDWKKEFSQEVYIMRKVRHKNVVQFIGACTKPPHFCIVTEFMSGGSVYDFLHKQKGVFKFPSLLRVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENHVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKRYDQKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPRNTHPKVVELLERCWQQDPTLRPDFCEIIEILQQLANEVGNEGEEKRRDKSGGFFSALRRGHL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01896 573 Pfam Protein tyrosine and serine/threonine kinase 293 542 IPR001245 GO:0004672|GO:0006468
Accr1g01896 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Accr1g01896 573 ProSiteProfiles Protein kinase domain profile. 293 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01896 573 MobiDBLite consensus disorder prediction 1 28 - -
Accr1g01896 573 CDD ACT_TyrKc 178 245 - -
Accr1g01896 573 Coils Coil 230 250 - -
Accr1g01896 573 SUPERFAMILY Protein kinase-like (PK-like) 280 542 IPR011009 -
Accr1g01896 573 CDD STKc_MAP3K-like 299 542 - -
Accr1g01896 573 PRINTS Tyrosine kinase catalytic domain signature 513 535 IPR001245 GO:0004672|GO:0006468
Accr1g01896 573 PRINTS Tyrosine kinase catalytic domain signature 404 422 IPR001245 GO:0004672|GO:0006468
Accr1g01896 573 PRINTS Tyrosine kinase catalytic domain signature 450 460 IPR001245 GO:0004672|GO:0006468
Accr1g01896 573 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672|GO:0006468
Accr1g01896 573 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672|GO:0006468
Accr1g01896 573 MobiDBLite consensus disorder prediction 110 150 - -
Accr1g01896 573 FunFam serine/threonine-protein kinase HT1 372 562 - -
Accr1g01896 573 ProSiteProfiles ACT domain profile. 180 256 IPR002912 -
Accr1g01896 573 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 128 549 - -
Accr1g01896 573 FunFam Serine/threonine-protein kinase isoform 1 283 371 - -
Accr1g01896 573 SUPERFAMILY ACT-like 178 242 IPR045865 -
Accr1g01896 573 SMART serkin_6 293 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01896 573 Gene3D Phosphorylase Kinase; domain 1 283 371 - -
Accr1g01896 573 Gene3D Transferase(Phosphotransferase) domain 1 372 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01896 Accr-Chr1 49433134 49439909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01896 1 572 MAP Kinase Kinase Kinase AT4G35780 63.258 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Accr1g01896 PK_Tyr_Ser-Thr 2.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01896 - - qsa:O6P43_002157 875.93