Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01894 ATGGATTTCTCCCTCAGGAAATCCTTCAAGTCCTATGGTCAATACAAGCGTTCCTCAGGAGACAGCGCTGAGGCCAGGCACGAAGAAGTCCCCATTCTCTACGAGCAAGATCAATCTTCCGAACATCATCTTCTTCAACCCCACGCCGCCGCCTCCGCCGCCGCCGCTCCTCCTTCCTCCTCCATGAACTCCCCCGGCAGCCCCACCTACAGCGGAGAGGTGATCGTCAAGATCGACGACGGCGACTCCAGATTCTCCCAAGCTGAGGCCTCCTCCTCCTACCAGCAGGGCGAGGCCAAGCTTAGGCGGGACCCCGACTTCTGGGAAGGTGATATTACCGCCACCAAGCATGAACAGAGTTTCGATTTCCAGCGACCTGATCCCAAACCCGACGACCCTCCCTCCAAGCTCATTGGTAATTTCTTGCACAGACAGCAGCTCTCCGGCGACATGTCCCTCGATATGGATTTGGAAATGGATGAGCTTCAACATGATCCTTACAAGACGTGTATGCCTTCGCTCGATGAGAATGCGACGATGAGTTTCTCCAGGGAGCTTAAAGTTTCCTTCGAAGAACCGCGTCCTAATTCCGCCGGGGAACCTGCAGGCGATTCCGTTCGACGAAGGTACAAGGATACACCAAACATGGAGGAGTTCCCGAAACCACCACAACCACCGCATTCAGACCGTCGCGGAGGCTCAAATCAGAATATTCATCCGGCAACCGGCGGAGACAGCGAGGTTGTGAGATGCACCTCAAACGCGTCTTTCGAGAGGAACCTTTCGTTGCAGAGGAAGTCGGGTTTGCTCAGAGCGAAAACCAAATCAAGACTTATTGACCCACCCGATGAACCCGAAAGGAAATCGGACCGGATTCAGAAATCGGGGCAGATTCAGAAATCAGGGCAGATTATGTCGGGTTTGCTGTCAGGGAATACTAAGAAAGGGGAGGAGGAGGAGGAAGACCCATTTTTGGAAGAGGATCTTCCAGACGATTTCAAAAACACCAAATTCAGCATCTGGATTCTACTAGAATGGTTGAGTTTGATCTTAATTGTAGCGGCATTGATAACCACTCTCTGCATCCCATTCTTAAGGGGGAAAAATCTATGGAAGCTCAAGTTATGGAAATGGGAGGTGATGGTCTTGGTTCTGATCTGTGGCAGGTTAGTTTCAGATTGGGTGATTCGAATTGCGGTGTACTTCATCGAAAGGAATTTCCTTCTACGTAAGAGGGTGCTCTACTTTGTATATGGTGTGAAGAAGGCAGTTCAAAATTGCCTCTGGCTGGCGCTTGTTTTGATTGCATGGCACTCTCTGTTCGACAAAAAAGTGGAAAGGGAGACAAAAAACGACTTCCTAGTATATGTGACCAAGGTTTTGGTATGCTTCTTGGTGGGAACTATAGTGTGGTTGGTGAAAACTCTGATGGTGAAGGTTCTGGCATCTTCGTTCCACGTCAGCACCTACTTTGACAGGATTCAAGAATCTCTGTTCAACCAGTTTGTGATCGAAACCCTGTCGGGGCCGCCGTTGGTGGAGATGCAGCGGCAGGAGGAGGAGGAGGAGAAGCTGGCTGAGGAGGTGATGAAGCTTCAGAATGCAGGAATTACTATACCGCCTGATCTGAGGGCATCAGCTTTCTCTTCTTTTAAGAGCCCGAAGGTTAATAGGAGTGGGGTGCTAAAGAGTCCTCATTTGAAAAGTGGACTTTCTCGACCACTTTCGAAGAAGTCAGATGATGGTGGGATACCTATTGATTACTTACATAAGATGAATCCTAGGAATGTGTCTGCATGGAATATGAAGAGGCTCATGAACATTGTGCGACATGGTGCTCTTTCTACTCTTGACGAGCAGATACAAGGTTCAACCTATGAAGATGAAAATACCACGCAAATCCGTAGTGAGAATGAGGCCAAAGCTGCTGCCAAAAAGATATTTCAGAATGTTACCAGGCGTGGATACAGGTTCATATACCTAGAGGACTTGTTGCGCTTTATGAGAGATGAAGAAGCTGTTAAGACCTTTAGTCTATTTGAAGGAGCACCTGATACCGGCAAAATCAGTAAATCGGCCTTGAAGAACTGGGTGGTGAACGCGTTCAGAGAGAGGAGAGCACTTGCTTTAACGTTGAACGACACCAAAACGGCAGTAAACAAACTTCACCGGATGCTCAATTTTCTAGTGGCCATTATTATTCTCATCATTTGGCTCTTACTACTAGAAATTGCCACCAGCAAATTTCTTGTCGTGGTGAGCTCCCAGCTCGTTCTGGCCGCATTCATATTCGGAAACACCTGCAAGACCATATTTGAAGCTATCATTTTCTTATTTGTCATGCACCCTTTTGATGTGGGAGATAGATGTGAAATTGATGGCGTTCAGATGGTTGTGGAAGAAATGAACATATTGACAACCATATTTCTGAGATACGACAATTTGAAAGTAACGATCCCTAACAATATTCTTGCTACCAAGCCTATTTATAATTTCTACCGAAGTCCAGATATGGGAGAAGCTGCGGAGTTCGTGGTACATTTTTCAACCCCACCCGAGAAGATCACACTCATCATAAACAGAATACAAAGTTACATCGAAAGCAAGAAGGAGTTCTGGTATCCCTCACCTATGATAGTGTACAAGGACGTGGAGACACTAAACGCGATACAAATAGCAGTGTGGCCAAGTCACAGAATGAACCACCAAGACATGGGCGAAAGGTTTATTAGAAGATCCCTTCTGATTGAAGAGATGGTCAAGATCTTCCGGGAGGTCGACATCCAGTTCCGGCTCCTTCCTCTCGACGTCAGCATTCGAAGCACGCCCACCACCTCCGACCGCCTTCCTCCGAGTTGGGTCACCGCCGCCACAACTCAGGCTTGA 2886 0.4785 MDFSLRKSFKSYGQYKRSSGDSAEARHEEVPILYEQDQSSEHHLLQPHAAASAAAAPPSSSMNSPGSPTYSGEVIVKIDDGDSRFSQAEASSSYQQGEAKLRRDPDFWEGDITATKHEQSFDFQRPDPKPDDPPSKLIGNFLHRQQLSGDMSLDMDLEMDELQHDPYKTCMPSLDENATMSFSRELKVSFEEPRPNSAGEPAGDSVRRRYKDTPNMEEFPKPPQPPHSDRRGGSNQNIHPATGGDSEVVRCTSNASFERNLSLQRKSGLLRAKTKSRLIDPPDEPERKSDRIQKSGQIQKSGQIMSGLLSGNTKKGEEEEEDPFLEEDLPDDFKNTKFSIWILLEWLSLILIVAALITTLCIPFLRGKNLWKLKLWKWEVMVLVLICGRLVSDWVIRIAVYFIERNFLLRKRVLYFVYGVKKAVQNCLWLALVLIAWHSLFDKKVERETKNDFLVYVTKVLVCFLVGTIVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEMQRQEEEEEKLAEEVMKLQNAGITIPPDLRASAFSSFKSPKVNRSGVLKSPHLKSGLSRPLSKKSDDGGIPIDYLHKMNPRNVSAWNMKRLMNIVRHGALSTLDEQIQGSTYEDENTTQIRSENEAKAAAKKIFQNVTRRGYRFIYLEDLLRFMRDEEAVKTFSLFEGAPDTGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILIIWLLLLEIATSKFLVVVSSQLVLAAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNLKVTIPNNILATKPIYNFYRSPDMGEAAEFVVHFSTPPEKITLIINRIQSYIESKKEFWYPSPMIVYKDVETLNAIQIAVWPSHRMNHQDMGERFIRRSLLIEEMVKIFREVDIQFRLLPLDVSIRSTPTTSDRLPPSWVTAATTQA 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01894 961 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 47 953 IPR016688 -
Accr1g01894 961 PIRSF Memb_At2g17000 36 961 IPR016688 -
Accr1g01894 961 Coils Coil 512 535 - -
Accr1g01894 961 Gene3D - 783 832 IPR023408 -
Accr1g01894 961 MobiDBLite consensus disorder prediction 276 294 - -
Accr1g01894 961 SUPERFAMILY Sm-like ribonucleoproteins 773 832 IPR010920 -
Accr1g01894 961 MobiDBLite consensus disorder prediction 559 578 - -
Accr1g01894 961 MobiDBLite consensus disorder prediction 272 300 - -
Accr1g01894 961 MobiDBLite consensus disorder prediction 229 248 - -
Accr1g01894 961 MobiDBLite consensus disorder prediction 185 248 - -
Accr1g01894 961 Pfam Mechanosensitive ion channel 725 930 IPR006685 GO:0016020|GO:0055085
Accr1g01894 961 MobiDBLite consensus disorder prediction 1 139 - -
Accr1g01894 961 FunFam Predicted mechanosensitive ion channel 783 832 - -
Accr1g01894 961 MobiDBLite consensus disorder prediction 56 70 - -
Accr1g01894 961 MobiDBLite consensus disorder prediction 20 36 - -
Accr1g01894 961 MobiDBLite consensus disorder prediction 99 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01894 Accr-Chr1 49425531 49429155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01894 71 958 Mechanosensitive Ion Channel Family AT1G78610 56.027 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01894 K22048 - gmx:102665658 1158.67