Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01878 ATGTTATCTCAGTTAAAGAACTTTCTGCGGGCCTGCTTGTGGCCAAGTTCCCATCAAAATTCACGTACAGGTTCAGATGCTGGAGGTCGACAAGATGGATTGTTGTGGTACAAAGACTCGGGGCAACACTTGAGTGGTGACTTTTCAATGGCTGTGATCCAAGCCAACAACTTGCTGGAGGATCAGAGCCAGATTGAATCGGGCTGTTTGAGCAGCAGTGAATCTGGTCCTTATGGCACCTTTGTTGGAGTTTATGATGGGCATGGAGGCCCTGAGACATCGCGGTTTATTAATTATAACCTCTTTCAGCATCTTAAGAGGTTTGCTGCAGAGCAGCAATCAATGTCAGTTGATGTAATTCGCAAGGCACTTCAAGCAACAGAAGAGGGATTTATGTCTCTTGTTGCCAGACAGTGGCCAATACAACCACAAATAGCATCTGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATATAGCTAATCTTGGTGATTCTAGGGCTGTTTTGGGAAGAGTGGTCAAGGCAACTGGAGATGTACTAGCCGTGCAGTTGTCAACAGAGCACAATGTGGGGATAGAGTCTGTAAGACAAGAGATGCATTCTTTGCACCCTGATGACCCACAAATTGTTGTTTTAAAACATAATGTATGGCGTGTAAAGGGCCTTATACAGATTTCAAGATCTATTGGTGACGTTTATTTGAAAAAGGCTGAGTTCAATAGAGAACCACTATATGCTAAGTTTCGACTTCGGGAGCCATTCAGTAGGCCGATACTAAGTTCTGAACCATCAATATCAGTGCACCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCTGATGGGCTCTGGGAACACCTTAGCAATCAAGATGCAGTTGATATAGTTCAAAATAATCCTCATCATGGAAGTGCAAGGAGGCTGGTGAAAGCTGCCCTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATACAGATCTAAAGAAGATTGATCGTGGGGTTCGTCGACATTTCCATGATGATATAACTGTGATTGTTGTGTTCCTGGACTCGAATCTCGTGAGCAGGGCTAGCTCTGTGAAGGTCAATGGTGTATCTGTTAGAGGTGGTGGCATCAACCTGCCTCATAACACACTGGCACCTTGGACGACATCAGCAGAGGCTGGTGGTACCTGA 1194 0.4422 MLSQLKNFLRACLWPSSHQNSRTGSDAGGRQDGLLWYKDSGQHLSGDFSMAVIQANNLLEDQSQIESGCLSSSESGPYGTFVGVYDGHGGPETSRFINYNLFQHLKRFAAEQQSMSVDVIRKALQATEEGFMSLVARQWPIQPQIASVGSCCLVGVICNGTLYIANLGDSRAVLGRVVKATGDVLAVQLSTEHNVGIESVRQEMHSLHPDDPQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFSRPILSSEPSISVHQLQPQDQFIIFASDGLWEHLSNQDAVDIVQNNPHHGSARRLVKAALQEAAKKREMRYTDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSVKVNGVSVRGGGINLPHNTLAPWTTSAEAGGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01878 397 CDD PP2Cc 48 355 IPR001932 -
Accr1g01878 397 PANTHER PROTEIN PHOSPHATASE 36 353 IPR015655 GO:0004722|GO:0006470
Accr1g01878 397 FunFam Phosphatase 2C family protein 36 365 - -
Accr1g01878 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Accr1g01878 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Accr1g01878 397 SMART PP2C_4 37 353 IPR001932 -
Accr1g01878 397 Pfam Protein phosphatase 2C 78 324 IPR001932 -
Accr1g01878 397 Gene3D - 36 366 IPR036457 -
Accr1g01878 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01878 Accr-Chr1 49302672 49305235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01878 1 396 PP2C-type Phosphatase Gene Family AT4G38520 73.990 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01878 - K01102 qsu:112028133 689.108