Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01870 ATGTCGAAGGAAGTGAGCGAAGAAGGCCAAACCCACCACCATGGCAAGGACTACGTGGATCCCCCGCCTGCTCCTCTCATTGACACCGCTGAGCTCAAGCTCTGGTCTTTCTACAGAGCCCTCATCGCCGAGTTCATTGCCACCCTTCTCTTCCTCTACATCACCGTTGCCACCGTCATCGGCCACAAAAAGCAAAGCGGCCCCTGCGACGGTGTTGGCCTCCTGGGCATCGCCTGGGCCTTCGGTGGCATGATTTTCATACTCGTATACTGCACCGCCGGTATCTCTGGTGGCCACATCAATCCTGCAGTTACATTTGGGCTGTTCTTGGCAAGGAAGGTGTCGCTCATCCGAGCTTTGGCGTACATGGTGGCTCAGTGCTTGGGTGCGATTTGCGGTACTGGGTTGGTGAAGGCGTTCATGAAGCACTCGTACAACTCACTCGGTGGTGGGGCCAACGAAGTGGCGTCCGGCTACACCAAAGGCACTGCTCTAGGCGCTGAGATTATTGGCACCTTTGTTCTGGTGTACACTGTTTTCTCCGCCACTGACCCTAAGAGAAGCGCCCGTGACTCTCACGTTCCTGTTTTGGCTCCATTGCCCATTGGATTTGCCGTTTTCATGGTTCATTTGGCTACCATCCCCATCACTGGAACAGGGATAAACCCAGCAAGGAGCTTAGGGGCTGCTGTTATCTACAACAATGGCAAAGCTTGGGACGACCAATGGATCTTCTGGGTTGGTCCATTTGTTGGAGCATTGGCAGCAGCAGCGTATCACCAGTATATTCTGAGAGCAGCAGCGATCAAGGCATTGGGATCGTTCCGGAGCAACCCCACCAACTAA 846 0.5437 MSKEVSEEGQTHHHGKDYVDPPPAPLIDTAELKLWSFYRALIAEFIATLLFLYITVATVIGHKKQSGPCDGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRALAYMVAQCLGAICGTGLVKAFMKHSYNSLGGGANEVASGYTKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNGKAWDDQWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01870 281 CDD MIP 39 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g01870 281 SUPERFAMILY Aquaporin-like 31 265 IPR023271 -
Accr1g01870 281 FunFam Probable aquaporin PIP1-2 24 279 - -
Accr1g01870 281 PRINTS Major intrinsic protein family signature 167 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g01870 281 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g01870 281 PRINTS Major intrinsic protein family signature 243 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g01870 281 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g01870 281 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g01870 281 PRINTS Major intrinsic protein family signature 203 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g01870 281 Gene3D Glycerol uptake facilitator protein. 24 281 IPR023271 -
Accr1g01870 281 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 270 IPR034294 -
Accr1g01870 281 MobiDBLite consensus disorder prediction 1 22 - -
Accr1g01870 281 ProSitePatterns MIP family signature. 99 107 IPR022357 -
Accr1g01870 281 MobiDBLite consensus disorder prediction 1 19 - -
Accr1g01870 281 NCBIfam MIP family channel protein 43 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr1g01870 281 Pfam Major intrinsic protein 32 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01870 Accr-Chr1 49209570 49210712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01870 1 281 Major Intrinsic Protein MIP AT4G35100 90.747 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01870 K09872 - egr:104418957 540.806